RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SAMD4BQ5PRF9 694 aaKnown RBP5.96□□□□□ -1.45
SMG1-217ENST00000569764 DCAF12L2Q5VW00 463 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 DPY19L2P2Q6ZN68 376 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 SSX7Q7RTT5 188 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 RNF144BQ7Z419 303 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 ARHGEF39Q8N4T4 335 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 OR8J3Q8NGG0 315 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 OR6N1Q8NGY5 312 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 TEX37Q96LM6 180 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 CDK15Q96Q40 435 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 EPYCQ99645 322 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 THTPAQ9BU02 230 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 PPP1R3EQ9H7J1 279 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 DNAJC15Q9Y5T4 150 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 H0YGG7 62 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 M0QYG6 137 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 TM4SF5O14894 197 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 TSPAN2O60636 221 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PTHP01270 115 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ZGLP1P0C6A0 271 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 SERPINB10P48595 397 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CDH11P55287 796 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 FAM199XQ6PEV8 388 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 SMARCD3Q6STE5 483 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 SHISA5Q8N114 240 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 MFSD9Q8NBP5 474 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR51Q1Q8NH59 317 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 NPRL2Q8WTW4 380 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 APH1BQ8WW43 257 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 TMEM208Q9BTX3 173 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 MROQ9BYG7 248 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 NT5DC2Q9H857 520 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ZNF701Q9NV72 531 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 SLC22A13Q9Y226 551 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CHD8Q9HCK8 2581 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CROCCQ5TZA2 2017 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 KIAA1549LQ6ZVL6 1849 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 GALR3O60755 368 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 AMY2AP04746 511 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ACSM4P0C7M7 580 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ST6GAL1P15907 406 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CDH2P19022 906 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 AMY2BP19961 511 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OMGP23515 440 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 RAB9AP51151 201 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 TAS2R38P59533 333 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CD69Q07108 199 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 FUT7Q11130 342 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OXA1LQ15070 435 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 HAGHQ16775 308 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 GCSAMLQ5JQS6 135 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CALHM1Q8IU99 346 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 C12orf45Q8N5I9 185 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 PTGR2Q8N8N7 351 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR51D1Q8NGF3 324 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 GPR151Q8TDV0 419 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 POP5Q969H6 163 aaKnown RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 TXNDC15Q96J42 360 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ZNF382Q96SR6 550 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 HBEGFQ99075 208 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 DOK1Q99704 481 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 SEMA6AQ9H2E6 1030 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PIGMQ9H3S5 423 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 ESRP2Q9H6T0 727 aaKnown RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 CRIM1Q9NZV1 1036 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 NUP214P35658 2090 aaPredicted RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 TRGV5A0A0B4J1U4 118 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 C7orf72A4D263 438 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 IGF2P01344 180 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 NBEAP1P0C6P0 100 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CD22P20273 847 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 IMPDH1P20839 514 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 DNAJB13P59910 316 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PCOLCEQ15113 449 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR1C1Q15619 314 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CPSF6Q16630 551 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMG1-217ENST00000569764 SPIN4Q56A73 249 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 DHRS4L2Q6PKH6 230 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 DLEU7Q6UYE1 221 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 TMPPEQ6ZT21 453 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 SVOPLQ8N434 492 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PXT1Q8NFP0 134 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR9Q2Q8NGE9 314 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR52B6Q8NGF0 335 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 OR2T11Q8NH01 316 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PPCDCQ96CD2 204 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PEX11GQ96HA9 241 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 COX14Q96I36 57 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CNBD2Q96M20 576 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 YTHDF1Q9BYJ9 559 aaKnown RBP5.96□□□□□ -1.46
SMG1-217ENST00000569764 NECAP2Q9NVZ3 263 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 C1orf109Q9NX04 203 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 PIGLQ9Y2B2 252 aa5.96□□□□□ -1.46
SMG1-217ENST00000569764 CLDN25C9JDP6 229 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 BCL6P41182 706 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 ELLP55199 621 aaPredicted RBP5.95□□□□□ -1.46
SMG1-217ENST00000569764 MS4A2Q01362 244 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 TMEM107Q6UX40 140 aa5.95□□□□□ -1.46
SMG1-217ENST00000569764 BTNL3Q6UXE8 466 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms