RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 IPCEF1Q8WWN9 437 aaPredicted RBP9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 PTP4A1Q93096 173 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 MAP6Q96JE9 813 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 CDADC1Q9BWV3 514 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 HCAR1Q9BXC0 346 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 HINT3Q9NQE9 182 aaKnown RBP9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 NKIRAS2Q9NYR9 191 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 STARD10Q9Y365 291 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 GRIP1Q9Y3R0 1128 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 COMMD3-BMI1R4GMX3 469 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 FN1P02751 2386 aaKnown RBP9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 HIVEP2P31629 2446 aa9.46□□□□□ -0.9
SHCBP1-207ENST00000569702 YLPM1P49750 1951 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 TVP23AA6NH52 213 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 FAM183AA6NL82 134 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 EBAG9O00559 213 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 SURF4O15260 269 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 CIB2O75838 187 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 NCR1O76036 304 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 HMGN1P05114 100 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 GYPBP06028 91 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PSKH1P11801 424 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 FCGR1AP12314 374 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ZNF823P16415 610 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 POU1F1P28069 291 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 FMO3P31513 532 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 RPS27P42677 84 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 RGS6P49758 472 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 BLVRAP53004 296 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ACTR3P61158 418 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 MRPS11P82912 194 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ECH1Q13011 328 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PSG7Q13046 419 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 RIN1Q13671 783 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PCGF3Q3KNV8 242 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ALKBH6Q3KRA9 238 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 TEX30Q5JUR7 227 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 COLCA1Q6ZS62 124 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 HIPK1Q86Z02 1210 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PARP8Q8N3A8 854 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 ZNF540Q8NDQ6 660 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 OR2AJ1Q8NGZ0 328 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 LRTOMTQ8WZ04 291 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 COG8Q96MW5 612 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PITX2Q99697 317 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PIMREGQ9BSJ6 248 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 POFUT1Q9H488 388 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 WDR76Q9H967 626 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 PAPOLBQ9NRJ5 636 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 DDX28Q9NUL7 540 aaKnown RBP9.45□□□□□ -0.9
SHCBP1-207ENST00000569702 LYNX1G3V0Z9 82 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 G3V2T6 193 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 MT-ND5P03915 603 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 ADH4P08319 380 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 LYNX1P0DP58 116 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 KITLGP21583 273 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 USF1P22415 310 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 COL8A2P25067 703 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 OTX1P32242 354 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 LIPAP38571 399 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 MAGEB1P43366 347 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 ENTPD1P49961 510 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 CRISP1P54107 249 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 RIPPLY3P57055 190 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 TMEM236Q5W0B7 351 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 KDM4DQ6B0I6 523 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 TMEM154Q6P9G4 183 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 SNX33Q8WV41 574 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 GTF3AQ92664 365 aaKnown RBP9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 RDH5Q92781 318 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 APOBEC3DQ96AK3 386 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 HAVCR1Q96D42 359 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 ATF6BQ99941 703 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 BPESC1Q9GZL8 116 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 GABARAPL1Q9H0R8 117 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 MED20Q9H944 212 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 MARCH7Q9H992 704 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 CYSLTR2Q9NS75 346 aa9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-207ENST00000569702 SONP18583 2426 aaKnown RBP9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 IGHV4-61A0A0C4DH41 118 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 ZSCAN5BA6NJL1 495 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 F5H5K5 113 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 ZNF593O00488 134 aaPredicted RBP9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 RP2O75695 350 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 GLCEO94923 617 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 TACSTD2P09758 323 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 ACSM4P0C7M7 580 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 RAC2P15153 192 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 ZNF81P51508 661 aa9.43□□□□□ -0.9
SHCBP1-207ENST00000569702 ESRRGP62508 458 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms