RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CCNIQ14094 377 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 GINS1Q14691 196 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 ATP6AP1Q15904 470 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 SLC18B1Q6NT16 456 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 ACSM5Q6NUN0 579 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 TMEM154Q6P9G4 183 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 IQCF1Q8N6M8 205 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 OR51L1Q8NGJ5 315 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 OR9Q1Q8NGQ5 310 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNRF4Q8WWF5 429 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 IPCEF1Q8WWN9 437 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 PITX2Q99697 317 aa11.81□□□□□ -0.52
HERPUD1-218ENST00000569569 DYSFO75923 2080 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.524e-7■■■□□ 18.8
HERPUD1-218ENST00000569569 TVP23AA6NH52 213 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 J3QW42 95 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 EBAG9O00559 213 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 HPXP02790 462 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 HMGN1P05114 100 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 GYPBP06028 91 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 DBHP09172 617 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 FCGR1AP12314 374 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 GIFP27352 417 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 NR4A2P43354 598 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 CDK5Q00535 292 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 ECH1Q13011 328 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 PCGF3Q3KNV8 242 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 HIPK1Q86Z02 1210 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 PTP4A1Q93096 173 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 ATF6BQ99941 703 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 NKIRAS2Q9NYR9 191 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 KIF17Q9P2E2 1029 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 CGGBP1Q9UFW8 167 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 STARD10Q9Y365 291 aa11.8□□□□□ -0.52
HERPUD1-218ENST00000569569 TANC2Q9HCD6 1990 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 PLSCR5A0PG75 271 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 G3V2T6 193 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 CLUP10909 449 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 PAICSP22234 425 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 COL8A2P25067 703 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 MAGEB1P43366 347 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 ENTPD1P49961 510 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 DAPP51397 102 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF81P51508 661 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 MMP15P51511 669 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 PSG7Q13046 419 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 RSPO1Q2MKA7 263 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 TMEM255AQ5JRV8 349 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 TEX30Q5JUR7 227 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 FAHD1Q6P587 224 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 OR6K6Q8NGW6 343 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 RDH5Q92781 318 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 APOBEC3DQ96AK3 386 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 TEX12Q9BXU0 123 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 BPESC1Q9GZL8 116 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 WDR76Q9H967 626 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 PAPOLBQ9NRJ5 636 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 COMMD3-BMI1R4GMX3 469 aa11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-218ENST00000569569 SONP18583 2426 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 FAM183AA6NL82 134 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 PRR23D1E9PI22 279 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 F5H5K5 113 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF593O00488 134 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 SURF4O15260 269 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 CD5LO43866 347 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 NCR1O76036 304 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 PRR23D2P0DMB1 279 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 LYNX1P0DP58 116 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 ZNF23P17027 643 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 KITLGP21583 273 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 ACHEP22303 614 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 RPS27P42677 84 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 CRISP1P54107 249 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 CCL8P80075 99 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 RIN1Q13671 783 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 PCK2Q16822 640 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 TMEM249Q2WGJ8 235 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 FAM209AQ5JX71 171 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 LINC01590Q5TEZ4 76 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 LYPD4Q6UWN0 246 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 AMIGO2Q86SJ2 522 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 ZDHHC13Q8IUH4 622 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 LRTOMTQ8WZ04 291 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 OTULINQ96BN8 352 aa11.78□□□□□ -0.52
HERPUD1-218ENST00000569569 HAVCR1Q96D42 359 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms