RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZFYVE21Q9BQ24 234 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 DDA1Q9BW61 102 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 PRO1933Q9H354 126 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 MYOZ1Q9NP98 299 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 KIAA1324LA8MWY0 1029 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SLC17A3O00476 420 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 EIF1BO60739 113 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 HSPB1P04792 205 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NID1P14543 1247 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 CRISP2P16562 243 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 EIF1P41567 113 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 DUSP8Q13202 625 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 EXT1Q16394 746 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 GPR162Q16538 588 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 FAM69BQ5VUD6 431 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 AADACL3Q5VUY0 350 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 LRRTM1Q86UE6 522 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF595Q8IYB9 648 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NEIL2Q969S2 332 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 UTP23Q9BRU9 249 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ELOVL2Q9NXB9 296 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PLSCR5A0PG75 271 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ANKRD30BLA7E2S9 258 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 CLDN1O95832 211 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PGA4P0DJD7 388 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PGA5P0DJD9 388 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SFTPCP11686 197 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SLC6A12P48065 614 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 LIPNQ5VXI9 398 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 LRP11Q86VZ4 500 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 MUC20Q8N307 709 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ARL14EPQ8N8R7 260 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 GCDHQ92947 438 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PARD6GQ9BYG4 376 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 RNF181Q9P0P0 153 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 DNMT3BQ9UBC3 853 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 CHST2Q9Y4C5 530 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 C2orf72A6NCS6 295 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 MYOGP15173 224 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NPBWR2P48146 333 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 CELF5Q8N6W0 485 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 IGSF8Q969P0 613 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 RNF167Q9H6Y7 350 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ADGRL4Q9HBW9 690 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TBX21Q9UL17 535 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TRBV9A0A0B4J1U6 114 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 LOC102723971A0A1B0GUV8 181 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 J3KTA2 159 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 HSD17B6O14756 317 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 OR8U8P0C7N1 319 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SMPD1P17405 629 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NDUFB7P17568 137 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SGCBQ16585 318 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF684Q5T5D7 378 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 FAM216AQ8WUB2 273 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 STARD4Q96DR4 205 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NDUFAF3Q9BU61 184 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 A0A1W2PPH5 198 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TLCD2A6NGC4 264 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TGM5O43548 720 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SEMA7AO75326 666 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 YIF1AO95070 293 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SLC10A3P09131 477 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 MSX1P28360 303 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 RAB38P57729 211 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 RPS21P63220 83 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 MRPL2Q5T653 305 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 MOB3CQ70IA8 216 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 GRASPQ7Z6J2 395 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PLPP6Q8IY26 295 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF687Q8N1G0 1237 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 NUBPLQ8TB37 319 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 FGF14Q92915 247 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 P2RY12Q9H244 342 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ABT1Q9ULW3 272 aaKnown RBP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PIK3C2AO00443 1686 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 A0A0B4J203 849 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 HAND1O96004 215 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 DCTDP32321 178 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 HNRNPKP61978 463 aaKnown RBP eCLIP6.49□□□□□ -1.37
CNOT1-216ENST00000569240 UBE2G1P62253 170 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 BTG2P78543 158 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 OR4N5Q8IXE1 308 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 PIANPQ8IYJ0 282 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 OR14C36Q8NHC7 312 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 FOXN4Q96NZ1 517 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 RSG1Q9BU20 258 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 ARL2-SNX15V9GYD0 113 aa6.49□□□□□ -1.37
CNOT1-216ENST00000569240 C9orf170A2RU37 121 aa6.48□□□□□ -1.37
CNOT1-216ENST00000569240 PPP6CO00743 305 aa6.48□□□□□ -1.37
CNOT1-216ENST00000569240 TCF21O43680 179 aa6.48□□□□□ -1.37
CNOT1-216ENST00000569240 ADAP1O75689 374 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms