RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CORO6Q6QEF8 472 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 USP51Q70EK9 711 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.25■□□□□ 0.35
CLK3-225ENST00000569063 OR8D4Q8NGM9 314 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 HAVCR1Q96D42 359 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 PLA2G12AQ9BZM1 189 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 FN3KQ9H479 309 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 PURGQ9UJV8 347 aaKnown RBP17.25■□□□□ 0.35
CLK3-225ENST00000569063 JMJD1CQ15652 2540 aa17.25■□□□□ 0.35
CLK3-225ENST00000569063 WNT9BO14905 357 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 TIMM8AO60220 97 aaPredicted RBP17.24■□□□□ 0.35
CLK3-225ENST00000569063 CD55P08174 381 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 HFEQ30201 348 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 SLC18B1Q6NT16 456 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 ADGRG5Q8IZF4 528 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 LNX2Q8N448 690 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 PTP4A1Q93096 173 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 CMBLQ96DG6 245 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 ELMOD3Q96FG2 381 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 CHID1Q9BWS9 393 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 EGLN1Q9GZT9 426 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 MSL2Q9HCI7 577 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 CYB5R1Q9UHQ9 305 aa17.24■□□□□ 0.35
CLK3-225ENST00000569063 MALRD1Q5VYJ5 2156 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 AQP12BA6NM10 295 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 B4DSR2 109 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 GYG2O15488 501 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 UBOX5O94941 541 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 GGT2P36268 569 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 CDK5R2Q13319 367 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 RSPO1Q2MKA7 263 aaPredicted RBP17.23■□□□□ 0.35
CLK3-225ENST00000569063 KRTAP27-1Q3LI81 207 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 DNAL1Q4LDG9 190 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 CFAP77Q6ZQR2 320 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 AQP12AQ8IXF9 295 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 OR5L1Q8NGL2 311 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 OR2T4Q8NH00 348 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 MDFIQ99750 246 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 CDADC1Q9BWV3 514 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 NARFLQ9H6Q4 476 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 TBC1D23Q9NUY8 699 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 MRPL22Q9NWU5 206 aaKnown RBP17.23■□□□□ 0.35
CLK3-225ENST00000569063 KCNG2Q9UJ96 466 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 BAIAP2Q9UQB8 552 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 CACNG2Q9Y698 323 aa17.23■□□□□ 0.35
CLK3-225ENST00000569063 HLA-DQA2P01906 255 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 RAC2P15153 192 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 HOXB6P17509 224 aaKnown RBP17.22■□□□□ 0.35
CLK3-225ENST00000569063 DVL1P1P54792 670 aaPredicted RBP17.22■□□□□ 0.35
CLK3-225ENST00000569063 LMO4P61968 165 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 ECH1Q13011 328 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 CD300LDQ6UXZ3 194 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 FBXW12Q6X9E4 464 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 CYB561A3Q8NBI2 242 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 SLC37A3Q8NCC5 494 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 OR2AJ1Q8NGZ0 328 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 APOBEC3DQ96AK3 386 aaPredicted RBP17.22■□□□□ 0.35
CLK3-225ENST00000569063 TSSK6Q9BXA6 273 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 TREM2Q9NZC2 230 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 CUBNO60494 3623 aa17.22■□□□□ 0.35
CLK3-225ENST00000569063 ARRDC5A6NEK1 342 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 CLDN25C9JDP6 229 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 CST1P01037 141 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 HNF1AP20823 631 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 THBS2P35442 1172 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 MVKQ03426 396 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 CR1LQ2VPA4 569 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 Q6ZR03 302 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 COLCA1Q6ZS62 124 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 LINC00346Q8IVM7 164 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 PROKR2Q8NFJ6 384 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 OR2T33Q8NG76 320 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 OR10G2Q8NGC3 310 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 CANT1Q8WVQ1 401 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 CCL17Q92583 94 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 SLC7A6OSQ96CW6 309 aaPredicted RBP17.21■□□□□ 0.35
CLK3-225ENST00000569063 PITX2Q99697 317 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 ATF6BQ99941 703 aa17.21■□□□□ 0.35
CLK3-225ENST00000569063 RBM4Q9BWF3 364 aaKnown RBP17.21■□□□□ 0.35
CLK3-225ENST00000569063 PNRC2Q9NPJ4 139 aaKnown RBP17.21■□□□□ 0.35
CLK3-225ENST00000569063 DHRS12A0PJE2 317 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 FAM157AC9JC47 383 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 ZNF823P16415 610 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 SRD5A1P18405 259 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 PYCR1P32322 319 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 TNFAIP6P98066 277 aaPredicted RBP17.2■□□□□ 0.34
CLK3-225ENST00000569063 HLXQ14774 488 aaPredicted RBP17.2■□□□□ 0.34
CLK3-225ENST00000569063 AVPI1Q5T686 147 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 IL17RELQ6ZVW7 336 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 OR4Q3Q8NH05 313 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 GIPC3Q8TF64 312 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 ZNRF4Q8WWF5 429 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 RAB1CQ92928 201 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 TIMD4Q96H15 378 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 FEVQ99581 238 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 NIPSNAP1Q9BPW8 284 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 C1QTNF5Q9BXJ0 243 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 NMNAT2Q9BZQ4 307 aa17.2■□□□□ 0.34
CLK3-225ENST00000569063 TMEFF2Q9UIK5 374 aaPredicted RBP17.2■□□□□ 0.34
CLK3-225ENST00000569063 WIPI2Q9Y4P8 454 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms