RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 C4orf45Q96LM5 186 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 Q96MT0 163 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 TEAD3Q99594 435 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 COPS4Q9BT78 406 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 YIPF3Q9GZM5 350 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 TUBG2Q9NRH3 451 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 CBLN4Q9NTU7 201 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 FAM118AQ9NWS6 357 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 HAO2Q9NYQ3 351 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 LAMP3Q9UQV4 416 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 PLEKHA6Q9Y2H5 1048 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 CMAHPQ9Y471 501 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 CCDC182A6NF36 153 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 B9A039 149 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 E9PQ18 207 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 APOC1P02654 83 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 HSD11B1P28845 292 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 HTR1FP30939 366 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 THBS4P35443 961 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 ATP6V1E1P36543 226 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 SERPINF1P36955 418 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 RPS27P42677 84 aaKnown RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 UCP2P55851 309 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 TPTEP56180 551 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 IL18R1Q13478 541 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 EFNB3Q15768 340 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 SLC25A30Q5SVS4 291 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 PAQR4Q8N4S7 273 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 DHRSXQ8N5I4 330 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 OR1J1Q8NGS3 322 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 ST7LQ8TDW4 575 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 NRGNQ92686 78 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 MRPL24Q96A35 216 aaKnown RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 ADI1Q9BV57 179 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 OR51B6Q9H340 312 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 PLK3Q9H4B4 646 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 PNRC2Q9NPJ4 139 aaKnown RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 TBCCD1Q9NVR7 557 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 DNAJC27Q9NZQ0 273 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 NKX1-2Q9UD57 310 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 LAMP5Q9UJQ1 280 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 RRP15Q9Y3B9 282 aaKnown RBP10.5□□□□□ -0.73
SF3B3-208ENST00000567250 PDZD2O15018 2839 aa10.5□□□□□ -0.73
SF3B3-208ENST00000567250 POLQO75417 2590 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 H0YAE9 185 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 H0YJX3 145 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 M0R135 149 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ATP6V1G2O95670 118 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 SOD3P08294 240 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 MRPL3P09001 348 aaKnown RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 OR4A8P0C604 315 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 CD53P19397 219 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 GCH1P30793 250 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 SLC6A9P48067 706 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 HSPA13P48723 471 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 KLF3P57682 345 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 PPP1CBP62140 327 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 IL5RAQ01344 420 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ADIPOQQ15848 244 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 OCLNQ16625 522 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 KCTD18Q6PI47 426 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 DRAM2Q6UX65 266 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 BCDIN3DQ7Z5W3 292 aaKnown RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ENTHD1Q8IYW4 607 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF101Q8IZC7 436 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 OR51G2Q8NGK0 314 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 THEM6Q8WUY1 208 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 RNF133Q8WVZ7 376 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ASB17Q8WXJ9 295 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 APOBEC3DQ96AK3 386 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 MBD6Q96DN6 1003 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF799Q96GE5 643 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF582Q96NG8 517 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 TRAF4Q9BUZ4 470 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ABHD6Q9BV23 337 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 LIME1Q9H400 295 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 SP140LQ9H930 580 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 CENPMQ9NSP4 180 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 CLN6Q9NWW5 311 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 GPR160Q9UJ42 338 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 GRIP1Q9Y3R0 1128 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 NAV2Q8IVL1 2488 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 ROS1P08922 2347 aa10.49□□□□□ -0.73
SF3B3-208ENST00000567250 A0A1W2PPW3 197 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF670-ZNF695F2Z2N8 137 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 F5H5K5 113 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 DLGAP1O14490 977 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 GPRIN2O60269 458 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 MT-ND5P03915 603 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ERCC1P07992 297 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 H2BFMP0C1H6 154 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SBK2P0C263 348 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 OTX1P32242 354 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 CAPGP40121 348 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 WNT5AP41221 380 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 MTNR1AP48039 350 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms