RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 IGHV2-70P01814 119 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 MSX2P35548 267 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-216ENST00000567023 RGS6P49758 472 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 DCAF12L2Q5VW00 463 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 DNM1P34Q6PK57 102 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 C1QL2Q7Z5L3 287 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 OR2Z1Q8NG97 314 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-216ENST00000567023 C1orf21Q9H246 121 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 RERGLQ9H628 205 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 IL1RAPQ9NPH3 570 aa12.03□□□□□ -0.48
COMMD4-216ENST00000567023 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-216ENST00000567023 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 LOC105371242A0A075B767 164 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 IGLV1-36A0A0B4J1U3 117 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 SURF4O15260 269 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 DBHP09172 617 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 FPR3P25089 353 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 COX10Q12887 443 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 RSPO1Q2MKA7 263 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-216ENST00000567023 TMEM155Q4W5P6 130 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 OTPQ5XKR4 325 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 ZBTB46Q86UZ6 589 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 LRRC28Q86X40 367 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-216ENST00000567023 OR6V1Q8N148 313 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 OR5L1Q8NGL2 311 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 NSMCE2Q96MF7 247 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 TSSK2Q96PF2 358 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 ERMAPQ96PL5 475 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-216ENST00000567023 SIGLEC11Q96RL6 698 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 COQ7Q99807 217 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 DCAF16Q9NXF7 216 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 TAS2R1Q9NYW7 299 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 B9D1Q9UPM9 204 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 LHFPL6Q9Y693 200 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 DYSFO75923 2080 aa12.02□□□□□ -0.49
COMMD4-216ENST00000567023 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 ISPDA4D126 451 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 IDH3BO43837 385 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 FOXH1O75593 365 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 PPP1R3DO95685 299 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 HIST1H1CP16403 213 aaKnown RBP12.01□□□□□ -0.49
COMMD4-216ENST00000567023 EPHA1P21709 976 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 SLC6A6P31641 620 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 IFNGR2P38484 337 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 GSSP48637 474 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 HMGA2P52926 109 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 HILS1P60008 231 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 SLC27A4Q6P1M0 643 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 C1orf94Q6P1W5 598 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 COLCA1Q6ZS62 124 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 KLHL36Q8N4N3 616 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 SLC26A10Q8NG04 563 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 FANK1Q8TC84 345 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-216ENST00000567023 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 SRA1Q9HD15 236 aaKnown RBP12.01□□□□□ -0.49
COMMD4-216ENST00000567023 ACTR3BQ9P1U1 418 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 OPN4Q9UHM6 478 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 PRPF19Q9UMS4 504 aaKnown RBP12.01□□□□□ -0.49
COMMD4-216ENST00000567023 PPP1R3CQ9UQK1 317 aa12.01□□□□□ -0.49
COMMD4-216ENST00000567023 ARHGAP32A7KAX9 2087 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 IFNL4K9M1U5 179 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 OR10H3O60404 316 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 GPANK1O95872 356 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 FSHBP01225 129 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 SBK2P0C263 348 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 CPT2P23786 658 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 ZFP36P26651 326 aaKnown RBP12□□□□□ -0.49
COMMD4-216ENST00000567023 SLC6A9P48067 706 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 ERFP50548 548 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 BTG1P62324 171 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 LCN2P80188 198 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 SPIBQ01892 262 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
COMMD4-216ENST00000567023 MEP1BQ16820 701 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 LEG1Q6P5S2 330 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
COMMD4-216ENST00000567023 OR8G5Q8NG78 346 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 ITLN1Q8WWA0 313 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 OR2V2Q96R30 315 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 C1QTNF5Q9BXJ0 243 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 MUC13Q9H3R2 512 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 C7orf69Q9H7B7 122 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 PATZ1Q9HBE1 687 aaKnown RBP12□□□□□ -0.49
COMMD4-216ENST00000567023 GCM1Q9NP62 436 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 POLR1DQ9Y2S0 133 aa12□□□□□ -0.49
COMMD4-216ENST00000567023 V9GYQ6 96 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms