RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	SHARPIN	Q9H0F6	387 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	PPA2	Q9H2U2	334 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	IGHV1OR21-1	A0A087WYE8	117 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507		A0A1B0GTI1	187 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMEM235	A6NFC5	223 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF736	B4DX44	427 aa	Predicted RBP	11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF354A	O60765	605 aa	Predicted RBP	11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	PIAS2	O75928	621 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	CD8A	P01732	235 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	FGF2	P09038	288 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	DNASE1L1	P49184	302 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZP4	Q12836	540 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMED4	Q7Z7H5	227 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	D2HGDH	Q8N465	521 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	JAGN1	Q8N5M9	183 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	CADM4	Q8NFZ8	388 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	AQP3	Q92482	292 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	CLDN23	Q96B33	292 aa		11.75	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMEM269	A0A1B0GVZ9	245 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR14I1	A6ND48	311 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	RAB27B	O00194	218 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	BCAT2	O15382	392 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	CYB5A	P00167	134 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	GIMD1	P0DJR0	217 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF28	P17035	718 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	NUP62	P37198	522 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	DHRS2	Q13268	280 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR1J2	Q8NGS2	313 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR6S1	Q8NH40	331 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	EDA	Q92838	391 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	GDF2	Q9UK05	429 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	FBXO4	Q9UKT5	387 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	C2orf72	A6NCS6	295 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	RLN2	P04090	185 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF823	P16415	610 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ARL4D	P49703	201 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	SRSF4	Q08170	494 aa	Known RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	CLVS2	Q5SYC1	327 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMEM81	Q6P7N7	255 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	DEGS2	Q6QHC5	323 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF813	Q6ZN06	617 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	C17orf107	Q6ZR85	190 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	SLC51B	Q86UW2	128 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	BPIFB2	Q8N4F0	458 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF248	Q8NDW4	579 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR4S1	Q8NGB4	309 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	SHD	Q96IW2	340 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	MESP1	Q9BRJ9	268 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	CTSF	Q9UBX1	484 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	FBXL2	Q9UKC9	423 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	LAMA5	O15230	3695 aa		11.74	□□□□□ -0.53
SCAPER-215	ENST00000565507	IGHV3-20	A0A0C4DH32	117 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507		A0A1B0GX78	115 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507		A6NIZ1	184 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	LGALS8	O00214	317 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	P2RY10	O00398	339 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	BET1	O15155	118 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	NUDT21	O43809	227 aa	Known RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	SPDEF	O95238	335 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	RAB6A	P20340	208 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	PRKACB	P22694	351 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	MMP16	P51512	607 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	RAP1B	P61224	184 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	RAP1A	P62834	184 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	RNF4	P78317	190 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	SHB	Q15464	509 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	ZNF260	Q3ZCT1	412 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMEM244	Q5VVB8	128 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	NKAIN3	Q8N8D7	197 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	BVES	Q8NE79	360 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	STEAP2	Q8NFT2	490 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR5M8	Q8NGP6	311 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	MAFA	Q8NHW3	353 aa	Predicted RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	RNF133	Q8WVZ7	376 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	MRGPRF	Q96AM1	343 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	DPYSL5	Q9BPU6	564 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	CNTD2	Q9H8S5	307 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	SEMA5B	Q9P283	1151 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	FARSA	Q9Y285	508 aa	Known RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	KRBOX1	C9JBD0	128 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	TEX46	H3BTG2	121 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	HP	P00738	406 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	OR7A5	Q15622	319 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	PAPD4	Q6PIY7	484 aa	Known RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	SHISA6	Q6ZSJ9	500 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	H1FNT	Q75WM6	255 aa	Predicted RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMPRSS9	Q7Z410	1059 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	CARF	Q8N187	725 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	EIF4E3	Q8N5X7	224 aa	Known RBP	11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	ACBD4	Q8NC06	268 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	PLPP5	Q8NEB5	264 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	MFSD8	Q8NHS3	518 aa		11.73	□□□□□ -0.53
SCAPER-215	ENST00000565507	TMEM234	Q8WY98	164 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms