RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PCDHGB1Q9Y5G3 927 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 SOX21Q9Y651 276 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-213ENST00000565173 VWFP04275 2813 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 A0A1W2PRQ8 180 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 CEACAM18A8MTB9 384 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 DCTN6O00399 190 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 XKRYO14609 159 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SLC22A2O15244 555 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SURF4O15260 269 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SLC16A7O60669 478 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 KHDRBS3O75525 346 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 NDUFB2O95178 105 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF205O95201 554 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 FSTL3O95633 263 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF682O95780 498 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SERPINA1P01009 418 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SDHAP31040 664 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 MDH2P40926 338 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 PMELP40967 661 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 CDKN2AP42771 156 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 OMPP47874 163 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 GSK3BP49841 420 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 MMP16P51512 607 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 FOXL1Q12952 345 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 KRR1Q13601 381 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 DGCR6Q14129 220 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SEC23BQ15437 767 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 KRTAP27-1Q3LI81 207 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ARMCX4Q5H9R4 360 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 GPR139Q6DWJ6 353 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 OR2T2Q6IF00 324 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 C1orf94Q6P1W5 598 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 OR5AS1Q8N127 324 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 OR8G5Q8NG78 346 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 RP9Q8TA86 221 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF420Q8TAQ5 688 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
CAPN3-213ENST00000565173 HSH2DQ96JZ2 352 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 MEGF10Q96KG7 1140 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 C7orf34Q96L11 122 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 TSSK2Q96PF2 358 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 GPA33Q99795 319 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SLC30A2Q9BRI3 323 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 NUAK2Q9H093 628 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 SYT4Q9H2B2 425 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ANKRD19PQ9H560 264 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF696Q9H7X3 374 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 NDUFAF4Q9P032 175 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 IL20RAQ9UHF4 553 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 CAPN7Q9Y6W3 813 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 ENPP4Q9Y6X5 453 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 TGP01266 2768 aa7.19□□□□□ -1.26
CAPN3-213ENST00000565173 H0YL77 283 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 CLDN34H7C241 214 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 J3QW42 95 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 SOCS2O14508 198 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 MLNRO43193 412 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 SNX3O60493 162 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 TXNDC12O95881 172 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 CYB5R3P00387 301 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 H1F0P07305 194 aaKnown RBP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 RNASE1P07998 156 aaKnown RBP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 PPIAL4GP0DN37 164 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 IGHV4-38-2P0DP08 117 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 COX4I1P13073 169 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 NCK1P16333 377 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 CPT2P23786 658 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 SLC7A2P52569 658 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 BAMBIQ13145 260 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 MEP1BQ16820 701 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF181Q2M3W8 571 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 ESCO2Q56NI9 601 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 SLC27A4Q6P1M0 643 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 RBMS3Q6XE24 437 aaKnown RBP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 DPY19L2P2Q6ZN68 376 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 COLCA1Q6ZS62 124 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 C9orf139Q6ZV77 190 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 FKBP9P1Q75LS8 142 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 RRM2BQ7LG56 351 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 ARPINQ7Z6K5 226 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 ATG16L2Q8NAA4 619 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 GJC3Q8NFK1 279 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 OR10AD1Q8NGE0 317 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 OR13G1Q8NGZ3 307 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 TAF15Q92804 592 aaKnown RBP eCLIP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 UPRTQ96BW1 309 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 COG8Q96MW5 612 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 HOPXQ9BPY8 73 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-213ENST00000565173 FUZQ9BT04 418 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 MRI1Q9BV20 369 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 RERGLQ9H628 205 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 PTTG3PQ9NZH4 202 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 ATPIF1Q9UII2 106 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 TMEM5Q9Y2B1 443 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 LRCH1Q9Y2L9 728 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 IER3IP1Q9Y5U9 82 aa7.18□□□□□ -1.26
CAPN3-213ENST00000565173 LHFPL6Q9Y693 200 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms