RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 IL20RAQ9UHF4 553 aa14.51□□□□□ -0.09
VPS9D1-203ENST00000563798 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
VPS9D1-203ENST00000563798 A0A1B0GWJ7 208 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 TMEM89A2RUT3 159 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 A8MXK9 166 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 F5H0A9 414 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 TRIM77I1YAP6 450 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 DCTN6O00399 190 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 DIRAS1O95057 198 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 FSTL3O95633 263 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 SBK2P0C263 348 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 ADRA2CP18825 462 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 FPR3P25089 353 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC6A9P48067 706 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 ERFP50548 548 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 BTG1P62324 171 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 LCN2P80188 198 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 COX10Q12887 443 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 OTPQ5XKR4 325 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC27A4Q6P1M0 643 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 C12orf54Q6X4T0 127 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 KLHL36Q8N4N3 616 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 OR8G5Q8NG78 346 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 ITLN1Q8WWA0 313 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 APOBEC3DQ96AK3 386 aaPredicted RBP14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 RBM4Q9BWF3 364 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 RERGLQ9H628 205 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 UBAP1Q9NZ09 502 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 MAGEL2Q9UJ55 1249 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 B9D1Q9UPM9 204 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 PPP1R3CQ9UQK1 317 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 TENM1Q9UKZ4 2725 aa14.5□□□□□ -0.09
VPS9D1-203ENST00000563798 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 ATP8B1O43520 1251 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 SNX3O60493 162 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 DBHP09172 617 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 CFPP27918 469 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC6A6P31641 620 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 ZMYND11Q15326 602 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 RSPO1Q2MKA7 263 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 ZBTB46Q86UZ6 589 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 OR6V1Q8N148 313 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 DEFB108BQ8NET1 73 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC26A10Q8NG04 563 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 OR52J3Q8NH60 311 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 DVL3Q92997 716 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 POP5Q969H6 163 aaKnown RBP14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 TSSK2Q96PF2 358 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 ERMAPQ96PL5 475 aaPredicted RBP14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 OR2V2Q96R30 315 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 OR52D1Q9H346 318 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 GCM1Q9NP62 436 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 ADA2Q9NZK5 511 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 CD300AQ9UGN4 299 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 DYSFO75923 2080 aa14.49□□□□□ -0.09
VPS9D1-203ENST00000563798 WNK2Q9Y3S1 2297 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 IQCF6A8MYZ5 107 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 IDH3BO43837 385 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 GADD45GO95257 159 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 PPP1R3DO95685 299 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 ZNF12P17014 697 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 MDH2P40926 338 aaKnown RBP14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 GSSP48637 474 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 HLXQ14774 488 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 ZNF181Q2M3W8 571 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 C1orf94Q6P1W5 598 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 MUC20Q8N307 709 aaPredicted RBP14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 RNF148Q8N7C7 305 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 OR13G1Q8NGZ3 307 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC30A2Q9BRI3 323 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 C1QTNF5Q9BXJ0 243 aa14.48□□□□□ -0.09
VPS9D1-203ENST00000563798 TRAPPC2LH3BP13 241 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 GPANK1O95872 356 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 FPR2P25090 351 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 MMP16P51512 607 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 ECH1Q13011 328 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 HNRNPA0Q13151 305 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 MEP1BQ16820 701 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 SPATS1Q496A3 300 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 SAMD4BQ5PRF9 694 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 LEG1Q6P5S2 330 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 PGAM4Q8N0Y7 254 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 BPIFB2Q8N4F0 458 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 ZDHHC22Q8N966 263 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 FANK1Q8TC84 345 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 MEGF10Q96KG7 1140 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 ZNF582Q96NG8 517 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 NMNAT3Q96T66 252 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 SLC6A7Q99884 636 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 NTN4Q9HB63 628 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 IL1RAPQ9NPH3 570 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 MMP26Q9NRE1 261 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 PTTG3PQ9NZH4 202 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 POLR1DQ9Y2S0 133 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 INSIG2Q9Y5U4 225 aa14.47□□□□□ -0.09
VPS9D1-203ENST00000563798 RENP00797 406 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 WNT2P09544 360 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 HIST1H1CP16403 213 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 IFNGR2P38484 337 aa14.46□□□□□ -0.09
VPS9D1-203ENST00000563798 SRP9P49458 86 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms