RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 LEG1Q6P5S2 330 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 NLRC3Q7RTR2 1065 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 CYP4Z1Q86W10 505 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 KLBQ86Z14 1044 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 BHLHE23Q8NDY6 225 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 OR8G5Q8NG78 346 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 TAF15Q92804 592 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B3-202ENST00000562722 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 RASD2Q96D21 266 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 SYT4Q9H2B2 425 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 MIOXQ9UGB7 285 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 COA3Q9Y2R0 106 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-202ENST00000562722 SOX21Q9Y651 276 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-202ENST00000562722 MEGF8Q7Z7M0 2845 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 IGHV2-70DA0A0C4DH43 119 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 OR6C6A6NF89 314 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 POM121CA8CG34 1229 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 CLDN34H7C241 214 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 FFAR1O14842 300 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 RER1O15258 196 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 DBHP09172 617 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 IRF2P14316 349 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 OMGP23515 440 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 DEFA6Q01524 100 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 CCDC92Q53HC0 331 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 HDXQ7Z353 690 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 MOGAT3Q86VF5 341 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 C1orf87Q8N0U7 546 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 RAB40AQ8WXH6 277 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 APOBEC3DQ96AK3 386 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 RCN3Q96D15 328 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 HSH2DQ96JZ2 352 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 WDR76Q9H967 626 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 TMEM165Q9HC07 324 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 SAR1AQ9NR31 198 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 TNFRSF19Q9NS68 423 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 GMPR2Q9P2T1 348 aaKnown RBP10.88□□□□□ -0.67
SF3B3-202ENST00000562722 TMEM5Q9Y2B1 443 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
SF3B3-202ENST00000562722 MDFIC2A0A1B0GVS7 189 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 F5H5P2 479 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 H0YL77 283 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 J3QW42 95 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 CXCR6O00574 342 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 SOCS2O14508 198 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 NDUFB2O95178 105 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 PPIAL4GP0DN37 164 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 ZNF26P17031 533 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-202ENST00000562722 MDKP21741 143 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-202ENST00000562722 CPT2P23786 658 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 PITPNBP48739 271 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 LIPEQ05469 1076 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 FGD3Q5JSP0 725 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 GPR139Q6DWJ6 353 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 FBXW12Q6X9E4 464 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 TMPRSS11FQ6ZWK6 438 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 FAM122BQ7Z309 247 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 ARPINQ7Z6K5 226 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 FAM156AQ8NDB6 213 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 TMIGD2Q96BF3 282 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 UPRTQ96BW1 309 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 TMEM246Q9BRR3 403 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 HCAR1Q9BXC0 346 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 NMNAT1Q9HAN9 279 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-202ENST00000562722 CMTM6Q9NX76 183 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 CLN8Q9UBY8 286 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 AP3M1Q9Y2T2 418 aa10.87□□□□□ -0.67
SF3B3-202ENST00000562722 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 IMPA2O14732 288 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 SERPINA1P01009 418 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 HLA-DPB1P04440 258 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 CRYBA1P05813 215 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 SDHAP31040 664 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 DNM1P34Q6PK57 102 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 BRD3OSQ6XYD6 125 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 C17orf107Q6ZR85 190 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 C9orf139Q6ZV77 190 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 ADCK1Q86TW2 530 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 POU5F2Q8N7G0 328 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 GJC3Q8NFK1 279 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 OR10S1Q8NGN2 331 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 FAM162AQ96A26 154 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 NUDT16L1Q9BRJ7 211 aaKnown RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 NUAK2Q9H093 628 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 KRCC1Q9NPI7 259 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 TMEM100Q9NV29 134 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 FGFR1OP2Q9NVK5 253 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms