RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 APOBEC3BQ9UH17 382 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 RAB22AQ9UL26 194 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 ICAM5Q9UMF0 924 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TFR2Q9UP52 801 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 FARSAQ9Y285 508 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.69□□□□□ -2.14
RTF1-207ENST00000561076 L3MBTL1Q9Y468 752 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 TBL2Q9Y4P3 447 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 WIF1Q9Y5W5 379 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 USH1CQ9Y6N9 552 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 DCAF1Q9Y4B6 1507 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 MSH6P52701 1360 aa1.69□□□□□ -2.14
RTF1-207ENST00000561076 BAZ1BQ9UIG0 1483 aaKnown RBP1.69□□□□□ -2.14
RTF1-207ENST00000561076 AK9Q5TCS8 1911 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 IGHV3OR16-12A0A075B7B8 117 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 IGHV1OR21-1A0A087WYE8 117 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TRAV8-4A0A0B4J246 113 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TRBV5-4A0A0C4DH59 114 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 FAM240AA0A1B0GVK7 77 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 VPS37CA5D8V6 355 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 MSGN1A6NI15 193 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 A6NIZ1 184 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 DBX1A6NMT0 343 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 EFCAB9A8MZ26 197 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ZNF487B1APH4 448 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 PRAC2D3DTV9 90 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ANKRD65E5RJM6 399 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 E9PAM4 449 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 H0YJX3 145 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 KCNK1O00180 336 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 CCRL2O00421 344 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 NME4O00746 187 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 AGPAT2O15120 278 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SLC31A1O15431 190 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 MAGEB4O15481 346 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 MPZL2O60487 215 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 DPM1O60762 260 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SHOX2O60902 331 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 ENTPD6O75354 484 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SCRG1O75711 98 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 GATBO75879 557 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 DCTN3O75935 186 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 GLSO94925 669 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 SEMA3DO95025 777 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TTC4O95801 387 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ACTL6AO96019 429 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 P01737 135 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ISG15P05161 165 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 PCCAP05165 728 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 FABP1P07148 127 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 GP1BAP07359 652 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 HCKP08631 526 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SLC35G6P0C7Q6 338 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 PAX1P15863 534 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ZNF12P17014 697 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 PRPS1L1P21108 318 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 HRH1P35367 487 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 OPRL1P41146 370 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 VDAC2P45880 294 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 GPR6P46095 362 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 RPL34P49207 117 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 PSMB2P49721 201 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 RPL14P50914 215 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 LIM2P55344 173 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 DLX6P56179 175 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 NDUFV3P56181 108 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 PROK1P58294 105 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TAS2R39P59534 338 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 RAP1BP61224 184 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 NUTF2P61970 127 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 MGAT3Q09327 533 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TSPAN31Q12999 210 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 DYNC1I2Q13409 638 aaKnown RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 FHL2Q14192 279 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 DPYSL3Q14195 570 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 MTF1Q14872 753 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 QPRTQ15274 297 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 CLEC12BQ2HXU8 276 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TMEM52BQ4KMG9 183 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ACSM3Q53FZ2 586 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 OR10J3Q5JRS4 329 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SPIN3Q5JUX0 258 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 LINC00242Q5T6M2 205 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 OR2T5Q6IEZ7 315 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 NIPAL1Q6NVV3 410 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 WDR74Q6RFH5 385 aaPredicted RBP1.68□□□□□ -2.14
RTF1-207ENST00000561076 FAM131AQ6UXB0 335 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 FOXL2NBQ6ZUU3 175 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 ZNF627Q7L945 461 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SLC51BQ86UW2 128 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 C10orf67Q8IYJ2 551 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 HS3ST5Q8IZT8 346 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SLC22A18ASQ8N1D0 253 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 TBC1D19Q8N5T2 526 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 METTL13Q8N6R0 699 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 NRACQ8N912 160 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 SUMF1Q8NBK3 374 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 CHST4Q8NCG5 386 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 CATSPER1Q8NEC5 780 aa1.68□□□□□ -2.14
RTF1-207ENST00000561076 PRSS33Q8NF86 280 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms