RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 COLCA1Q6ZS62 124 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 MAPK1IP1LQ8NDC0 245 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 ICA1LQ8NDH6 482 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 IPCEF1Q8WWN9 437 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 GTF3AQ92664 365 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 RHNO1Q9BSD3 238 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 SEMA6AQ9H2E6 1030 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 TPK1Q9H3S4 243 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 MARCH7Q9H992 704 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 HINT3Q9NQE9 182 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 ZFHX3Q15911 3703 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 A0A1W2PPW3 197 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 LY6G6DO95868 133 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 CSF3P09919 207 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 NAT2P11245 290 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF823P16415 610 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF23P17027 643 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ENTPD1P49961 510 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 MMP15P51511 669 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ESRRGP62508 458 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 PSG7Q13046 419 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 PTGES3Q15185 160 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ARL9Q6T311 187 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 UNQ6126/PRO20091Q6UXV3 157 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 ZDHHC13Q8IUH4 622 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 CPOQ8IVL8 374 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 OR2AJ1Q8NGZ0 328 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 FAM168AQ92567 244 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 PITX2Q99697 317 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 PKP2Q99959 881 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 CDADC1Q9BWV3 514 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 SLCO1C1Q9NYB5 712 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 OAZ3Q9UMX2 235 aa13.04□□□□□ -0.32
SNRPA1-213ENST00000560856 FN1P02751 2386 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 C17orf100A8MU93 164 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 J3QW42 95 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 NCR1O76036 304 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 GLCEO94923 617 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 HPXP02790 462 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ACSM4P0C7M7 580 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 DAOP14920 347 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 SLC2A5P22732 501 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 TUBG1P23258 451 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 OTX1P32242 354 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 PDLIM4P50479 330 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 BLVRAP53004 296 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 SELENOVP59797 346 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 EFNB1P98172 346 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ECH1Q13011 328 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 NKPD1Q17RQ9 610 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 TMEM154Q6P9G4 183 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 NAA40Q86UY6 237 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 TIGD4Q8IY51 512 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF786Q8N393 782 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 OR6K6Q8NGW6 343 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ATF6BQ99941 703 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 MYOZ1Q9NP98 299 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 TUBG2Q9NRH3 451 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 KIF17Q9P2E2 1029 aa13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 NSD1Q96L73 2696 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-213ENST00000560856 LOC390937A0A1W2PQ73 354 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 ZAR1LA6NP61 321 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 PRR23D1E9PI22 279 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 LYNX1G3V0Z9 82 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 PRR23D2P0DMB1 279 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 LYNX1P0DP58 116 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 SLC25A16P16260 332 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 KITLGP21583 273 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 ANOS1P23352 680 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 GIFP27352 417 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 GSTT1P30711 240 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 GCH1P30793 250 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 MAGEB1P43366 347 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 RGS6P49758 472 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 MOGQ16653 247 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 SLX4IPQ5VYV7 408 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 ZFP1Q6P2D0 407 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 UBASH3BQ8TF42 649 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 HAVCR1Q96D42 359 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 CMBLQ96DG6 245 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 CIB1Q99828 191 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 OSBPL10Q9BXB5 764 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 C1QTNF5Q9BXJ0 243 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 NKIRAS2Q9NYR9 191 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 GPR160Q9UJ42 338 aa13.02□□□□□ -0.33
SNRPA1-213ENST00000560856 NIPBLQ6KC79 2804 aaeCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms