RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	ZMAT3	Q9HA38	289 aa	Known RBP	11.45	□□□□□ -0.58
RNF31-223	ENST00000560754	ASH2L	Q9UBL3	628 aa		11.45	□□□□□ -0.58
RNF31-223	ENST00000560754	TMEM5	Q9Y2B1	443 aa		11.45	□□□□□ -0.58
RNF31-223	ENST00000560754	PCDHGB1	Q9Y5G3	927 aa		11.45	□□□□□ -0.58
RNF31-223	ENST00000560754	CAPN7	Q9Y6W3	813 aa		11.45	□□□□□ -0.58
RNF31-223	ENST00000560754		A0A1W2PRQ8	180 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	NME4	O00746	187 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	RER1	O15258	196 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	SASH3	O75995	380 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	ZNF682	O95780	498 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	DBH	P09172	617 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	CDKN2A	P42771	156 aa	Known RBP	11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	RGS6	P49758	472 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	FXYD6P3	P58550	94 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	DGCR6	Q14129	220 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	HLX	Q14774	488 aa	Predicted RBP	11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	ZNF181	Q2M3W8	571 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	ARMCX4	Q5H9R4	360 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	COLCA1	Q6ZS62	124 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	C9orf139	Q6ZV77	190 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	FKBP9P1	Q75LS8	142 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	RASD2	Q96D21	266 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	ZNF570	Q96NI8	536 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	MRI1	Q9BV20	369 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	NUAK2	Q9H093	628 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	SYT4	Q9H2B2	425 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	IL20RA	Q9UHF4	553 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	LRCH1	Q9Y2L9	728 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	ENPP4	Q9Y6X5	453 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	TRRAP	Q9Y4A5	3859 aa		11.44	□□□□□ -0.58
RNF31-223	ENST00000560754	NOTCH1	P46531	2555 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	KIR2DS1	A0A191URI9	304 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	DNAJC9-AS1	A6NH13	148 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	POM121C	A8CG34	1229 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	CEACAM18	A8MTB9	384 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	IMPA2	O14732	288 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	RNASE1	P07998	156 aa	Known RBP	11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	OMP	P47874	163 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	MMP16	P51512	607 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	ESCO2	Q56NI9	601 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	LRRN1	Q6UXK5	716 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	DPY19L2P2	Q6ZN68	376 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	PTCHD4	Q6ZW05	846 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	POU5F2	Q8N7G0	328 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	ATG16L2	Q8NAA4	619 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	GJC3	Q8NFK1	279 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	OR52E2	Q8NGJ4	325 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	UPRT	Q96BW1	309 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	FAM46A	Q96IP4	442 aa	Known RBP	11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	HSH2D	Q96JZ2	352 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	MEGF10	Q96KG7	1140 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	C7orf34	Q96L11	122 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	SLC30A2	Q9BRI3	323 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	FUZ	Q9BT04	418 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	C1QTNF5	Q9BXJ0	243 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	PRDM13	Q9H4Q3	707 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	EFCAB1	Q9HAE3	211 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	ARMCX1	Q9P291	453 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	MIOX	Q9UGB7	285 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754	IER3IP1	Q9Y5U9	82 aa		11.43	□□□□□ -0.58
RNF31-223	ENST00000560754		H0YL77	283 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	DCTN6	O00399	190 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	GSTA4	O15217	222 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	MLNR	O43193	412 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	PLAT	P00750	562 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	SERPINA1	P01009	418 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	COX4I1	P13073	169 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	RHCE	P18577	417 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	PMEL	P40967	661 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	SRP9	P49458	86 aa	Known RBP	11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	GSK3B	P49841	420 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	8e-13	■■□□□ 14.2
RNF31-223	ENST00000560754	BAMBI	Q13145	260 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	KRR1	Q13601	381 aa	Known RBP	11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	SLC9A3R2	Q15599	337 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	KRTAP27-1	Q3LI81	207 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	OTP	Q5XKR4	325 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	OR2T2	Q6IF00	324 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	C1orf94	Q6P1W5	598 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	HACD2	Q6Y1H2	254 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	ADCK1	Q86TW2	530 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	CYP4Z1	Q86W10	505 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	RAB40A	Q8WXH6	277 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	ZNF582	Q96NG8	517 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	COQ7	Q99807	217 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	TMEM246	Q9BRR3	403 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	NDEL1	Q9GZM8	345 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	CCDC134	Q9H6E4	229 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	NDUFAF4	Q9P032	175 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	B9D1	Q9UPM9	204 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	LHFPL6	Q9Y693	200 aa		11.42	□□□□□ -0.58
RNF31-223	ENST00000560754	IQCF6	A8MYZ5	107 aa		11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	NDUFAB1	O14561	156 aa		11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	KCNAB3	O43448	404 aa		11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	H1F0	P07305	194 aa	Known RBP	11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	CRABP1	P29762	137 aa		11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	GATA4	P43694	442 aa		11.41	□□□□□ -0.58
RNF31-223	ENST00000560754	SLC7A2	P52569	658 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms