RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 IGHV2-70P01814 119 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 SEMG1P04279 462 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 HSD17B1P14061 328 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 RAC2P15153 192 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 HIST1H1CP16403 213 aaKnown RBP8.62□□□□□ -1.03
LDLR-214ENST00000560628 TNFRSF1AP19438 455 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 SLC6A6P31641 620 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 PRSS12P56730 875 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 RSPO1Q2MKA7 263 aaPredicted RBP8.62□□□□□ -1.03
LDLR-214ENST00000560628 SLC35F1Q5T1Q4 408 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 C12orf54Q6X4T0 127 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 C1QL2Q7Z5L3 287 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 JAZF1Q86VZ6 243 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 LRRC28Q86X40 367 aaPredicted RBP8.62□□□□□ -1.03
LDLR-214ENST00000560628 LINC00346Q8IVM7 164 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 ZNF283Q8N7M2 679 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 GJC3Q8NFK1 279 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 SEMA6DQ8NFY4 1073 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 OR5L1Q8NGL2 311 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 NANPQ8TBE9 248 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 MCUR1Q96AQ8 359 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 COG8Q96MW5 612 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 OR2V2Q96R30 315 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 NSRP1Q9H0G5 558 aaKnown RBP8.62□□□□□ -1.03
LDLR-214ENST00000560628 OR52D1Q9H346 318 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 FN3KQ9H479 309 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 WDR76Q9H967 626 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 RPRD1BQ9NQG5 326 aaKnown RBP8.62□□□□□ -1.03
LDLR-214ENST00000560628 MMP26Q9NRE1 261 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 CD300AQ9UGN4 299 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 OPN4Q9UHM6 478 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 PPP1R3CQ9UQK1 317 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 LHFPL6Q9Y693 200 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 WNK2Q9Y3S1 2297 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 OR6C68A6NDL8 312 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 F5H5K5 113 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 H0YL77 283 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 TRAPPC2LH3BP13 241 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 ARPC2O15144 300 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SURF4O15260 269 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 ATP8B1O43520 1251 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 FOXH1O75593 365 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 HLA-DQA2P01906 255 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 FABP3P05413 133 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 FPR3P25089 353 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 NOS3P29474 1203 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 RRM2P31350 389 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 RGS6P49758 472 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SEC61A1P61619 476 aaKnown RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 HIST1H3AP68431 136 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 ZMYND11Q15326 602 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SAMD4BQ5PRF9 694 aaKnown RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 HIST2H3PS2Q5TEC6 136 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 DNM1P34Q6PK57 102 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 HIST2H3AQ71DI3 136 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 NAA40Q86UY6 237 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 PGAM4Q8N0Y7 254 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 KLHL36Q8N4N3 616 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 TEX29Q8N6K0 151 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 BHLHE23Q8NDY6 225 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SDR9C7Q8NEX9 313 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SLC26A10Q8NG04 563 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 OR10AD1Q8NGE0 317 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 OR52E2Q8NGJ4 325 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 ZNF420Q8TAQ5 688 aaPredicted RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 GNPDA2Q8TDQ7 276 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 APOBEC3DQ96AK3 386 aaPredicted RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 ZNF582Q96NG8 517 aaPredicted RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 PITX2Q99697 317 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 SLC6A7Q99884 636 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 CDADC1Q9BWV3 514 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 PATZ1Q9HBE1 687 aaKnown RBP8.61□□□□□ -1.03
LDLR-214ENST00000560628 IL19Q9UHD0 177 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 TAGLN3Q9UI15 199 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 TMCC3Q9ULS5 477 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 DYSFO75923 2080 aa8.61□□□□□ -1.03
LDLR-214ENST00000560628 F5H5P2 479 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 ARPC3O15145 178 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 CYB5R3P00387 301 aaPredicted RBP8.6□□□□□ -1.03
LDLR-214ENST00000560628 GATA3P23771 443 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 PYCR1P32322 319 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 IFNGR2P38484 337 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 SLC6A9P48067 706 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 GSSP48637 474 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 BTG1P62324 171 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 GNGT1P63211 74 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 ACTG1P63261 375 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 MXRA7P84157 204 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 COX10Q12887 443 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 TMEM155Q4W5P6 130 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 CLEC12AQ5QGZ9 265 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 SLC18B1Q6NT16 456 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 SLC27A4Q6P1M0 643 aa8.6□□□□□ -1.03
LDLR-214ENST00000560628 PGM2L1Q6PCE3 622 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms