RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 DOLPP1Q86YN1 238 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SKA3Q8IX90 412 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 ST6GALNAC3Q8NDV1 305 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 C1orf162Q8NEQ5 155 aaPredicted RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 OR10S1Q8NGN2 331 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 OR1K1Q8NGR3 316 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 ABHD4Q8TB40 342 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SPTSSAQ969W0 71 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 RNF166Q96A37 237 aaPredicted RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 C4orf45Q96LM5 186 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 KCTD7Q96MP8 289 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 KCNJ15Q99712 375 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SFXN3Q9BWM7 321 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SP140LQ9H930 580 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 PNRC2Q9NPJ4 139 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 PLEK2Q9NYT0 353 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 FRRS1LQ9P0K9 344 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 PROCRQ9UNN8 238 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 IGSF10Q6WRI0 2623 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 OR4C45A6NMZ5 311 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF879B4DU55 563 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 LOC110117498-PIK3R3F6TDL0 507 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 SYNGR3O43761 229 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 DOK2O60496 412 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ARL6IP5O75915 188 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TOXO94900 526 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZFPL1O95159 310 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 UBL3O95164 117 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 CGAP01215 116 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 IL1AP01583 271 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ITGA5P08648 1049 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 MMP7P09237 267 aaPredicted RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 UBCP0CG48 685 aaKnown RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 GLI4P10075 376 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 COX5BP10606 129 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF32P17041 273 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 COX5AP20674 150 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 PAX7P23759 505 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 MAPK3P27361 379 aaPredicted RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 OPRM1P35372 400 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 CASP6P55212 293 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TPTEP56180 551 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 NCS1P62166 190 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 SPCS2Q15005 226 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 P2RY6Q15077 328 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 DGUOKQ16854 277 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 WDR38Q5JTN6 314 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 C1QTNF12Q5T7M4 302 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM244Q5VVB8 128 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM211Q6ICI0 200 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 VWA1Q6PCB0 445 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 UNQ9370/PRO34162Q6UXP9 181 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF704Q6ZNC4 412 aaPredicted RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 SPATC1Q76KD6 591 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 PRSS35Q8N3Z0 413 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF676Q8N7Q3 588 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 HTRA1Q92743 480 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM203Q969S6 136 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 STARD4Q96DR4 205 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 PDCD1LG2Q9BQ51 273 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 CENPOQ9BU64 300 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 MED18Q9BUE0 208 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 HDHD5Q9BXW7 423 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 DCSTAMPQ9H295 470 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 PIGMQ9H3S5 423 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 G6PC2Q9NQR9 355 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 FAM206AQ9NX38 181 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 GALNT8Q9NY28 637 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF629Q9UEG4 869 aaPredicted RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 NUFIP1Q9UHK0 495 aaKnown RBP7.54□□□□□ -1.2
TRAF3-209ENST00000560463 OR52A1Q9UKL2 312 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 FBXL3Q9UKT7 428 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 SLC5A6Q9Y289 635 aa7.54□□□□□ -1.2
TRAF3-209ENST00000560463 CACNA1BQ00975 2339 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 NBASA2RRP1 2371 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 A0A1W2PPW3 197 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 OR6C6A6NF89 314 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 E9PLN8 166 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 WNT11O96014 354 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 PNPP00491 289 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 RAF1P04049 648 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 ACHEP22303 614 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 IGHV1-2P23083 117 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 SOX6P35712 828 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 KIR3DL2P43630 455 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 SERPINB10P48595 397 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 MTNR1BP49286 362 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 FOXG1P55316 489 aaPredicted RBP7.53□□□□□ -1.2
TRAF3-209ENST00000560463 RPS11P62280 158 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAF3-209ENST00000560463 PSG4Q00888 419 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 PLP2Q04941 152 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 FOXF2Q12947 444 aa7.53□□□□□ -1.2
TRAF3-209ENST00000560463 LY6DQ14210 128 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms