RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SRSF7Q16629 238 aaKnown RBP eCLIP5.05□□□□□ -1.6
HERC1-208ENST00000560462 ZNF718Q3SXZ3 478 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 KLHL26Q53HC5 615 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 HSP90AA5PQ58FG0 334 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 TMEM255AQ5JRV8 349 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 C9orf152Q5JTZ5 239 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 SPATA46Q5T0L3 261 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 TMEM225Q6GV28 225 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 SULT1C3Q6IMI6 304 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 C10orf99Q6UWK7 81 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 CREB3L2Q70SY1 520 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 OR2W3Q7Z3T1 314 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 COMMD6Q7Z4G1 85 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 PRUNE1Q86TP1 453 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 OR8H3Q8N146 312 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 TMEM99Q8N816 258 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 KLHL30-AS1Q8NEE0 82 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 SLC26A10Q8NG04 563 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 PIFOQ8TCI5 191 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 C17orf50Q8WW18 174 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 C1orf54Q8WWF1 131 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 RFKQ969G6 155 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 THUMPD3Q9BV44 507 aaKnown RBP5.05□□□□□ -1.6
HERC1-208ENST00000560462 EBPLQ9BY08 206 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 CADM1Q9BY67 442 aaKnown RBP5.05□□□□□ -1.6
HERC1-208ENST00000560462 SHCBP1LQ9BZQ2 653 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 CTPS2Q9NRF8 586 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 TBCCD1Q9NVR7 557 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.05□□□□□ -1.6
HERC1-208ENST00000560462 ERVK-18Q9QC07 812 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 ONECUT1Q9UBC0 465 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 HAO1Q9UJM8 370 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 GUCA1BQ9UMX6 200 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 A4GNTQ9UNA3 340 aa5.05□□□□□ -1.6
HERC1-208ENST00000560462 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 CCL24O00175 119 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ANKRD28O15084 1053 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SURF4O15260 269 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ZNF264O43296 627 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 EIF4E2O60573 245 aaKnown RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 NKX2-2O95096 273 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 AKR7A3O95154 331 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SNAP29O95721 258 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 HNRNPCP07910 306 aaKnown RBP eCLIP5.04□□□□□ -1.6
HERC1-208ENST00000560462 SNRNP70P08621 437 aaKnown RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 GP9P14770 177 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ETS2P15036 469 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 GABRB1P18505 474 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 CCNA2P20248 432 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 PAX6P26367 422 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SLC15A1P46059 708 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 HTR5AP47898 357 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 KCNJ1P48048 391 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 UBE2E1P51965 193 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 BASP1P80723 227 aaKnown RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 SNX1Q13596 522 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 PLAC9Q5JTB6 97 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 CDKL4Q5MAI5 379 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 CCNJQ5T5M9 372 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 FAM45BPQ6NSW5 357 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 LRIG3Q6UXM1 1119 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ZNF813Q6ZN06 617 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 C18orf65Q6ZTR6 163 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 PRSS45Q7RTY3 260 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 TMEM219Q86XT9 240 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 L3MBTL4Q8NA19 623 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 OR2Z1Q8NG97 314 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 FAM45AQ8TCE6 357 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 RNF183Q96D59 192 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SAT2Q96F10 170 aaPredicted RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 LYZL4Q96KX0 146 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ATF6BQ99941 703 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 MMADHCQ9H3L0 296 aaPredicted RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 ACER3Q9NUN7 267 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 ZNF224Q9NZL3 707 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 PAK5Q9P286 719 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 IL19Q9UHD0 177 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 MKLN1Q9UL63 735 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SNX5Q9Y5X3 404 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 SIRT4Q9Y6E7 314 aaPredicted RBP5.04□□□□□ -1.6
HERC1-208ENST00000560462 SORL1Q92673 2214 aa5.04□□□□□ -1.6
HERC1-208ENST00000560462 USP17L23D6RBM5 183 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 MANBAO00462 879 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 CTDSP2O14595 271 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 PRYO14603 147 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 MPPED1O15442 326 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 XRCC3O43542 346 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 BRI3O95415 125 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ZSCAN5DPP0CG00 497 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 B4GALT1P15291 398 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ATP6V1B1P15313 513 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 SPNP16150 400 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 TSPAN8P19075 237 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 POU1F1P28069 291 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 FNTAP49354 379 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 NCBP2P52298 156 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERC1-208ENST00000560462 DLX1P56177 255 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms