RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ABCD2Q9UBJ2 740 aa17.25■□□□□ 0.35
TSPAN3-206ENST00000559373 LHFPL6Q9Y693 200 aa17.25■□□□□ 0.35
TSPAN3-206ENST00000559373 TMEM89A2RUT3 159 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 AHCYL1O43865 530 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 FOXH1O75593 365 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 CYB5R3P00387 301 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 RHCEP18577 417 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 TNFRSF1AP19438 455 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 LSM6P62312 80 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 HSP90B2PQ58FF3 399 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 GPR139Q6DWJ6 353 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 LEG1Q6P5S2 330 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 HACD2Q6Y1H2 254 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 JAZF1Q86VZ6 243 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 LRRC28Q86X40 367 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 BCL6BQ8N143 479 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 KLHL36Q8N4N3 616 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 TEX29Q8N6K0 151 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 NDEL1Q9GZM8 345 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 GCM1Q9NP62 436 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 DCAF13Q9NV06 445 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 IL19Q9UHD0 177 aa17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 SOX21Q9Y651 276 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-206ENST00000559373 IGHV3OR16-10A0A075B7F0 116 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 FSHBP01225 129 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 SLC6A9P48067 706 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 RPS6KA3P51812 740 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 FAM201AQ5SY85 155 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 SMARCD3Q6STE5 483 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 DPY19L2P2Q6ZN68 376 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 LINC00346Q8IVM7 164 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 SIGLECL1Q8N7X8 197 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 OR4K13Q8NH42 304 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 DVL3Q92997 716 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 GPX7Q96SL4 187 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 WACQ9BTA9 647 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 ZNF69Q9UC07 566 aa17.23■□□□□ 0.35
TSPAN3-206ENST00000559373 F5H5P2 479 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 TMEM178BH3BS89 294 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 RAC2P15153 192 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 GATA3P23771 443 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 MMP16P51512 607 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 SPIBQ01892 262 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 ZNF154Q13106 437 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 KRT72Q14CN4 511 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 RSPO1Q2MKA7 263 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 ARMCX4Q5H9R4 360 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 KLF17Q5JT82 389 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 OR6V1Q8N148 313 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 SPICQ8N5J4 248 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 FANK1Q8TC84 345 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 TAF15Q92804 592 aaKnown RBP eCLIP17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 JMJD8Q96S16 334 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 NMNAT3Q96T66 252 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 FUZQ9BT04 418 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 RBM4Q9BWF3 364 aaKnown RBP17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 MYLK2Q9H1R3 596 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 B9D1Q9UPM9 204 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 PKD1L1Q8TDX9 2849 aa17.22■□□□□ 0.35
TSPAN3-206ENST00000559373 CEACAM18A8MTB9 384 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 MLNRO43193 412 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 HLA-DPB1P04440 258 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 FPR2P25090 351 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 UBA52P62987 128 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 HOXA4Q00056 320 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 CFAP77Q6ZQR2 320 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 ADCK1Q86TW2 530 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 MOGAT3Q86VF5 341 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 C19orf18Q8NEA5 215 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 OR8G5Q8NG78 346 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 MEGF10Q96KG7 1140 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 OR52D1Q9H346 318 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 SPAG4Q9NPE6 437 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 RPRD1BQ9NQG5 326 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 SAMD4AQ9UPU9 718 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 INSIG2Q9Y5U4 225 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 AUP1Q9Y679 476 aa17.21■□□□□ 0.35
TSPAN3-206ENST00000559373 IGLV1-36A0A0B4J1U3 117 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 F5H5K5 113 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 SURF4O15260 269 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 GADD45GO95257 159 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 TXNDC12O95881 172 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 HIST1H1CP16403 213 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 KCNMB1Q16558 191 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 TMEM155Q4W5P6 130 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 FBXW12Q6X9E4 464 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 SDR9C7Q8NEX9 313 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 GJC3Q8NFK1 279 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 OR5L1Q8NGL2 311 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 CMTM5Q96DZ9 223 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 DHRS1Q96LJ7 313 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 ZNF582Q96NG8 517 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 IFT27Q9BW83 186 aa17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 DDX28Q9NUL7 540 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-206ENST00000559373 F5H0A9 414 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-206ENST00000559373 NDUFAB1O14561 156 aa17.19■□□□□ 0.34
TSPAN3-206ENST00000559373 GMNNO75496 209 aa17.19■□□□□ 0.34
TSPAN3-206ENST00000559373 HLA-DQA2P01906 255 aa17.19■□□□□ 0.34
TSPAN3-206ENST00000559373 ZNF12P17014 697 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms