RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 PTP4A1Q93096 173 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 TECTBQ96PL2 329 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SPACA5Q96QH8 159 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 ENKD1Q9H0I2 346 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 PDE7BQ9NP56 450 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 LCTP09848 1927 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 PLXNA1Q9UIW2 1896 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 CENPVL1A0A0U1RR11 272 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 C2orf72A6NCS6 295 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 DCTN6O00399 190 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 KCNAB3O43448 404 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 NTSR1P30989 418 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SDHAP31040 664 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SFTPDP35247 375 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 RPL29P47914 159 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 RPL18Q07020 188 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 ETFDHQ16134 617 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 DMRTC1Q5HYR2 192 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 RBMS3Q6XE24 437 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 MRPL43Q8N983 215 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 SIGLEC11Q96RL6 698 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 ADAT1Q9BUB4 502 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 NRSN2Q9GZP1 204 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 KIR3DX1Q9H7L2 352 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 FGF22Q9HCT0 170 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SLC22A7Q9Y694 548 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 TMEM272A0A1B0GTI8 110 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 LOC107986453A0A1B0GWG9 222 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 OR6C68A6NDL8 312 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 VSTM2BA6NLU5 285 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 ZNF891A8MT65 544 aaPredicted RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 AQP8O94778 261 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 NSA2O95478 260 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 HLA-DQB1P01920 261 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SLC35E2P0CK97 266 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 OMGP23515 440 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 GABRA2P47869 451 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 RAB13P51153 203 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 TLE4Q04727 773 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 RIN1Q13671 783 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 OR2T2Q6IF00 324 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 LPCAT3Q6P1A2 487 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 LYG2Q86SG7 212 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 ARIH2OSQ8N7S6 290 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 OR1S2Q8NGQ3 325 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 MARCH1Q8TCQ1 289 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 PATE1Q8WXA2 126 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 FGF13Q92913 245 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 FAM122AQ96E09 287 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 MRGPRX3Q96LB0 322 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 FAM173AQ9BQD7 235 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 PARD6AQ9NPB6 346 aa6.46□□□□□ -1.38
USP3-210ENST00000559192 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.46□□□□□ -1.381e-7■□□□□ 9.5
USP3-210ENST00000559192 RYDENQ9NUL5 291 aaKnown RBP6.46□□□□□ -1.38
USP3-210ENST00000559192 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 MFSD2BA6NFX1 497 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 TBX19O60806 448 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 GABRA1P14867 456 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 NTF3P20783 257 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR1D4P47884 311 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 EEF1A1P68104 462 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 C9orf152Q5JTZ5 239 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 NAXDQ8IW45 347 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR2G2Q8NGZ5 317 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 DAZLQ92904 295 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 CMSS1Q9BQ75 279 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 A0A0B4J2E0 115 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 A0A1B0GX12 115 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 A6NIZ1 184 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR6C76A6NM76 312 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 SLC2A1P11166 492 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 HNRNPA2B1P22626 353 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 PTAFRP25105 342 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 PSMB6P28072 239 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 GJA4P35212 333 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 LIMK1P53667 647 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 RAP1BP61224 184 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 GLIPR1L1Q6UWM5 242 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 GKN2Q86XP6 184 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 KLHDC7BQ96G42 594 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 POLMQ9NP87 494 aaPredicted RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 MRPS18AQ9NVS2 196 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 RAB22AQ9UL26 194 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 TP53TG5Q9Y2B4 290 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 HCFC2Q9Y5Z7 792 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 ZNF207O43670 478 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 CTAG2O75638 210 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 HLA-HP01893 362 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 H3F3AP84243 136 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 IAH1Q2TAA2 248 aaPredicted RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 TMPRSS11FQ6ZWK6 438 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 ANGPTL5Q86XS5 388 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 FAM219AQ8IW50 185 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 SIGLECL1Q8N7X8 197 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR5B2Q96R09 309 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms