RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 A0A1W2PPL8 197 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 C12orf71A8MTZ7 269 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 H3BSA7 217 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 BHLHE40O14503 412 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 IMPA2O14732 288 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 ARPC3O15145 178 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 SOX14O95416 240 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 SCG5P05408 212 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 TACSTD2P09758 323 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 IGHV4-31P0DP07 118 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 COX5BP10606 129 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 WNT5AP41221 380 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 KLF3P57682 345 aaPredicted RBP9.62□□□□□ -0.87
BMP4-204ENST00000558961 GABARAPL2P60520 117 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 ERVS71-1P61550 626 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 CSNK2BP67870 215 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 MRPS11P82912 194 aaKnown RBP9.62□□□□□ -0.87
BMP4-204ENST00000558961 GINS1Q14691 196 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 OCLNQ16625 522 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 PTCHD4Q6ZW05 846 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 ZNF101Q8IZC7 436 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 OR4Q3Q8NH05 313 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 FANK1Q8TC84 345 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 UBASH3BQ8TF42 649 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 FOXN4Q96NZ1 517 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 ZNF416Q9BWM5 594 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 SYT4Q9H2B2 425 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 OR52D1Q9H346 318 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 TPK1Q9H3S4 243 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 TIMM10BQ9Y5J6 103 aa9.62□□□□□ -0.87
BMP4-204ENST00000558961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.877e-30■■□□□ 13.6
BMP4-204ENST00000558961 IGHV4-61A0A0C4DH41 118 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 A6NHS1 94 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 A8MV72 311 aaPredicted RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 SLC1A7O00341 560 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 MPZL2O60487 215 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 MRPS14O60783 128 aaKnown RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 IGHV3-13P01766 116 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 TFAP2AP05549 437 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 HTR1AP08908 422 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 GUCA1AP43080 201 aaPredicted RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 ALDH3B1P43353 468 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 SLC15A1P46059 708 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 CDC42P60953 191 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 LSM6P62312 80 aaKnown RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 IL5RAQ01344 420 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 AQP6Q13520 282 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 KCNMB1Q16558 191 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 ELFN2Q5R3F8 820 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 ZNF362Q5T0B9 420 aaPredicted RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 MBNL2Q5VZF2 373 aaKnown RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 RPL13AP3Q6NVV1 102 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 TMEM154Q6P9G4 183 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 UNQ6126/PRO20091Q6UXV3 157 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 PRIMA1Q86XR5 153 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 LNX2Q8N448 690 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 TSPAN14Q8NG11 270 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 OR8J1Q8NGP2 316 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 AKR7LQ8NHP1 331 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 CNIH3Q8TBE1 160 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 FAM81AQ8TBF8 368 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 SYNPRQ8TBG9 265 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 C11orf40Q8WZ69 217 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 BATF3Q9NR55 127 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 PAK1IP1Q9NWT1 392 aaPredicted RBP9.61□□□□□ -0.87
BMP4-204ENST00000558961 NKIRAS2Q9NYR9 191 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 IL20RAQ9UHF4 553 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 SCOCQ9UIL1 159 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 FZR1Q9UM11 496 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 IER3IP1Q9Y5U9 82 aa9.61□□□□□ -0.87
BMP4-204ENST00000558961 MALRD1Q5VYJ5 2156 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 SONP18583 2426 aaKnown RBP9.6□□□□□ -0.87
BMP4-204ENST00000558961 IGLV1-36A0A0B4J1U3 117 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 A0A1W2PPW3 197 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 C5orf49A4QMS7 147 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 C17orf100A8MU93 164 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 H3BN98 237 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 DCTN6O00399 190 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 KHDRBS3O75525 346 aaKnown RBP9.6□□□□□ -0.87
BMP4-204ENST00000558961 NCR1O76036 304 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 PPP1R3DO95685 299 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 CLPTM1O96005 669 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 HPXP02790 462 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 GAAP10253 952 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 POU1F1P28069 291 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 SLC6A6P31641 620 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 GRK5P34947 590 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 CDKN2AP42771 156 aaKnown RBP9.6□□□□□ -0.87
BMP4-204ENST00000558961 ALDH3B2P48448 385 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 GZMKP49863 264 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 GDI2P50395 445 aaKnown RBP9.6□□□□□ -0.87
BMP4-204ENST00000558961 SELENOVP59797 346 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 SLC35A2P78381 396 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 GGTLC2Q14390 218 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
BMP4-204ENST00000558961 ZNF774Q6NX45 483 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms