RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CENPMQ9NSP4 180 aa15.05■□□□□ -0
TPM1-214ENST00000558544 DDX28Q9NUL7 540 aaKnown RBP15.05■□□□□ -0
TPM1-214ENST00000558544 CLN6Q9NWW5 311 aa15.05■□□□□ -0
TPM1-214ENST00000558544 EIF3KQ9UBQ5 218 aaKnown RBP15.05■□□□□ -0
TPM1-214ENST00000558544 LAMP5Q9UJQ1 280 aa15.05■□□□□ -0
TPM1-214ENST00000558544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.05■□□□□ -0
TPM1-214ENST00000558544 GRIP1Q9Y3R0 1128 aa15.05■□□□□ -0
TPM1-214ENST00000558544 PDZD2O15018 2839 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ZNF878C9JN71 531 aa15.04■□□□□ -0
TPM1-214ENST00000558544 F5H5K5 113 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ABHD16AO95870 558 aa15.04■□□□□ -0
TPM1-214ENST00000558544 SBK2P0C263 348 aa15.04■□□□□ -0
TPM1-214ENST00000558544 PCSK6P29122 969 aa15.04■□□□□ -0
TPM1-214ENST00000558544 NUDT6P53370 316 aa15.04■□□□□ -0
TPM1-214ENST00000558544 UCP2P55851 309 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ERVS71-1P61550 626 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ECH1Q13011 328 aa15.04■□□□□ -0
TPM1-214ENST00000558544 TMED1Q13445 227 aa15.04■□□□□ -0
TPM1-214ENST00000558544 IL18R1Q13478 541 aa15.04■□□□□ -0
TPM1-214ENST00000558544 TAF13Q15543 124 aa15.04■□□□□ -0
TPM1-214ENST00000558544 PAMR1Q6UXH9 720 aa15.04■□□□□ -0
TPM1-214ENST00000558544 C20orf204Q6ZNR8 217 aa15.04■□□□□ -0
TPM1-214ENST00000558544 RFPL4BQ6ZWI9 263 aa15.04■□□□□ -0
TPM1-214ENST00000558544 SLC35F2Q8IXU6 374 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ZNF454Q8N9F8 522 aa15.04■□□□□ -0
TPM1-214ENST00000558544 ABHD4Q8TB40 342 aa15.04■□□□□ -0
TPM1-214ENST00000558544 CNIH3Q8TBE1 160 aa15.04■□□□□ -0
TPM1-214ENST00000558544 TFAP2CQ92754 450 aa15.04■□□□□ -0
TPM1-214ENST00000558544 RNFT2Q96EX2 444 aa15.04■□□□□ -0
TPM1-214ENST00000558544 C4orf45Q96LM5 186 aa15.04■□□□□ -0
TPM1-214ENST00000558544 TTTY10Q9BZA0 68 aa15.04■□□□□ -0
TPM1-214ENST00000558544 COPS3Q9UNS2 423 aa15.04■□□□□ -0
TPM1-214ENST00000558544 LCKP06239 509 aa15.03■□□□□ -0
TPM1-214ENST00000558544 APOBEC3AP31941 199 aaPredicted RBP15.03■□□□□ -0
TPM1-214ENST00000558544 TTKP33981 857 aa15.03■□□□□ -0
TPM1-214ENST00000558544 GLRXP35754 106 aa15.03■□□□□ -0
TPM1-214ENST00000558544 RAD52P43351 418 aa15.03■□□□□ -0
TPM1-214ENST00000558544 MTNR1AP48039 350 aa15.03■□□□□ -0
TPM1-214ENST00000558544 RPS23P62266 143 aaKnown RBP15.03■□□□□ -0
TPM1-214ENST00000558544 POU4F2Q12837 409 aa15.03■□□□□ -0
TPM1-214ENST00000558544 RSPO1Q2MKA7 263 aaPredicted RBP15.03■□□□□ -0
TPM1-214ENST00000558544 KRTAP27-1Q3LI81 207 aa15.03■□□□□ -0
TPM1-214ENST00000558544 ZNF544Q6NX49 715 aa15.03■□□□□ -0
TPM1-214ENST00000558544 C8orf59Q8N0T1 100 aaPredicted RBP15.03■□□□□ -0
TPM1-214ENST00000558544 FBXL14Q8N1E6 418 aa15.03■□□□□ -0
TPM1-214ENST00000558544 RFLNBQ8N5W9 214 aa15.03■□□□□ -0
TPM1-214ENST00000558544 OR1J1Q8NGS3 322 aa15.03■□□□□ -0
TPM1-214ENST00000558544 TMEM171Q8WVE6 324 aa15.03■□□□□ -0
TPM1-214ENST00000558544 RNF133Q8WVZ7 376 aa15.03■□□□□ -0
TPM1-214ENST00000558544 Q96MT0 163 aa15.03■□□□□ -0
TPM1-214ENST00000558544 BCL2L14Q9BZR8 327 aa15.03■□□□□ -0
TPM1-214ENST00000558544 ZNF442Q9H7R0 627 aa15.03■□□□□ -0
TPM1-214ENST00000558544 PLEKHA6Q9Y2H5 1048 aa15.03■□□□□ -0
TPM1-214ENST00000558544 ARFGEF3Q5TH69 2177 aa15.02■□□□□ -0
TPM1-214ENST00000558544 SNTNA6NMZ2 147 aa15.02■□□□□ -0
TPM1-214ENST00000558544 M0R135 149 aa15.02■□□□□ -0
TPM1-214ENST00000558544 WBP4O75554 376 aaKnown RBP15.02■□□□□ -0
TPM1-214ENST00000558544 NGFP01138 241 aa15.02■□□□□ -0
TPM1-214ENST00000558544 SOD3P08294 240 aa15.02■□□□□ -0
TPM1-214ENST00000558544 DANCRP0C864 163 aa15.02■□□□□ -0
TPM1-214ENST00000558544 DBTP11182 482 aaKnown RBP15.02■□□□□ -0
TPM1-214ENST00000558544 ALOX5APP20292 161 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ATP6V1E1P36543 226 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ISL1P61371 349 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ZNF91Q05481 1191 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ADIPOQQ15848 244 aa15.02■□□□□ -0
TPM1-214ENST00000558544 SMN1Q16637 294 aaKnown RBP15.02■□□□□ -0
TPM1-214ENST00000558544 MSMPQ1L6U9 139 aa15.02■□□□□ -0
TPM1-214ENST00000558544 SPATA46Q5T0L3 261 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ARL9Q6T311 187 aa15.02■□□□□ -0
TPM1-214ENST00000558544 USP51Q70EK9 711 aa15.02■□□□□ -0
TPM1-214ENST00000558544 MUC15Q8N387 334 aa15.02■□□□□ -0
TPM1-214ENST00000558544 SPTSSAQ969W0 71 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ZNF799Q96GE5 643 aa15.02■□□□□ -0
TPM1-214ENST00000558544 DCLRE1CQ96SD1 692 aaKnown RBP15.02■□□□□ -0
TPM1-214ENST00000558544 TBX5Q99593 518 aa15.02■□□□□ -0
TPM1-214ENST00000558544 CCL19Q99731 98 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ELOVL3Q9HB03 270 aa15.02■□□□□ -0
TPM1-214ENST00000558544 AMBNQ9NP70 447 aa15.02■□□□□ -0
TPM1-214ENST00000558544 FAIMQ9NVQ4 179 aa15.02■□□□□ -0
TPM1-214ENST00000558544 ST6GALNAC2Q9UJ37 374 aa15.02■□□□□ -0
TPM1-214ENST00000558544 FZR1Q9UM11 496 aa15.02■□□□□ -0
TPM1-214ENST00000558544 LAMP3Q9UQV4 416 aa15.02■□□□□ -0
TPM1-214ENST00000558544 CYSRT1A8MQ03 144 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 PRR32B1ATL7 298 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 PSMD9O00233 223 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 ICMTO60725 284 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 RAF1P04049 648 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 H2BFMP0C1H6 154 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 OR4A8P0C604 315 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 ACSM4P0C7M7 580 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 HSD11B1P28845 292 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 OPRL1P41146 370 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 SLC6A9P48067 706 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 PRKXP51817 358 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 TPTEP56180 551 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 CXCR4P61073 352 aa15.01□□□□□ -0.01
TPM1-214ENST00000558544 GRB2P62993 217 aaKnown RBP15.01□□□□□ -0.01
TPM1-214ENST00000558544 RGS7BPQ6MZT1 257 aaPredicted RBP15.01□□□□□ -0.01
TPM1-214ENST00000558544 LRRN1Q6UXK5 716 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms