RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MAP6Q96JE9 813 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ATF6BQ99941 703 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 GABARAPL3Q9BY60 117 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 OR2J1Q9GZK6 312 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ORC6Q9Y5N6 252 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 IGLV3-9A0A075B6K5 115 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 M0R129 80 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 PRKYO43930 277 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ALPLP05186 524 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ADRA2AP08913 450 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 GCH1P30793 250 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ALDH3B1P43353 468 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ALDH3A2P51648 485 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 EFNA4P52798 201 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ECH1Q13011 328 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 MAD2L1BPQ15013 274 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 PCK2Q16822 640 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 NKPD1Q17RQ9 610 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 CLEC12BQ2HXU8 276 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ALKBH6Q3KRA9 238 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 SLC35D3Q5M8T2 416 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 C12orf73Q69YU5 71 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 CBR4Q8N4T8 237 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 TCEANCQ8N8B7 351 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 MARS2Q96GW9 593 aaKnown RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 SORCS2Q96PQ0 1159 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 DCLRE1CQ96SD1 692 aaKnown RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 C9orf16Q9BUW7 83 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 RAB1BQ9H0U4 201 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 MARCH7Q9H992 704 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 PNRC2Q9NPJ4 139 aaKnown RBP10.6□□□□□ -0.71
SMAD3-205ENST00000558428 TBCCD1Q9NVR7 557 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 USE1Q9NZ43 259 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
SMAD3-205ENST00000558428 ERICH4A6NGS2 130 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 F5H5K5 113 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TLX2O43763 284 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-205ENST00000558428 LY6HO94772 140 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 ERCC1P07992 297 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-205ENST00000558428 CD99P14209 185 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 SLC2A5P22732 501 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 MPV17P39210 176 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 RGS6P49758 472 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 RAD23AP54725 363 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 APOFQ13790 326 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 EIF2B1Q14232 305 aaKnown RBP10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TEX30Q5JUR7 227 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 SHFQ7M4L6 423 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 DPY19L4Q7Z388 723 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TIGD4Q8IY51 512 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 OR10S1Q8NGN2 331 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TMEM163Q8TC26 289 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 KLF14Q8TD94 323 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-205ENST00000558428 SNX33Q8WV41 574 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 IPCEF1Q8WWN9 437 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-205ENST00000558428 EME1Q96AY2 570 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 COG8Q96MW5 612 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 COPS4Q9BT78 406 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TPK1Q9H3S4 243 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 MS4A5Q9H3V2 200 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 CENPMQ9NSP4 180 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 SLCO1C1Q9NYB5 712 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 GPR160Q9UJ42 338 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 STARD10Q9Y365 291 aa10.59□□□□□ -0.71
SMAD3-205ENST00000558428 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 TRIM64A6NGJ6 449 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF878C9JN71 531 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 H3BSA7 217 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 J3QW42 95 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 SELENOFO60613 162 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 F12P00748 615 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 IGHV3-13P01766 116 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ACSM4P0C7M7 580 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 NAT2P11245 290 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 NAA10P41227 235 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 TPTEP56180 551 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 TAF13Q15543 124 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 MOGQ16653 247 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 RSPO1Q2MKA7 263 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 KRTAP27-1Q3LI81 207 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 LCN1P1Q5VSP4 162 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 MBNL2Q5VZF2 373 aaKnown RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 CLEC2AQ6UVW9 174 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ZBTB49Q6ZSB9 765 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 SPATC1Q76KD6 591 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF525Q8N782 197 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 NEU4Q8WWR8 484 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 IL4I1Q96RQ9 567 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 TMUB1Q9BVT8 246 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms