RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ADAM29Q9UKF5 820 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 A0A1B0GWA3 101 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ZNF732B4DXR9 585 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 SHISA8B8ZZ34 492 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 FURINP09958 794 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
SPG11-210ENST00000558319 PMP22Q01453 160 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ENDOGQ14249 297 aaKnown RBP12.75□□□□□ -0.37
SPG11-210ENST00000558319 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 UBALD1Q8TB05 177 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 MAGT1Q9H0U3 335 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 SPNS1Q9H2V7 528 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
SPG11-210ENST00000558319 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 NKX6-3A6NJ46 265 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 HCRTR1O43613 425 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 CIDEAO60543 219 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 MMP11P24347 488 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 MFSD4AQ8N468 514 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 OR10X1Q8NGY0 326 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
SPG11-210ENST00000558319 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 MYO18AQ92614 2054 aaKnown RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 SLC5A10A0PJK1 596 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 DRGXA6NNA5 263 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 SFTA3P0C7M3 94 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PRDX1Q06830 199 aaKnown RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 OR8G1Q15617 311 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PRSS36Q5K4E3 855 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 UCK1Q9HA47 277 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 C5orf49A4QMS7 147 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 SPINK4O60575 86 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 RAB5AP20339 215 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PSMB6P28072 239 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 TRA2BP62995 288 aaKnown RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 OR10G3Q8NGC4 313 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 TECTBQ96PL2 329 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 MOGAT2Q3SYC2 334 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 GOT1L1Q8NHS2 421 aaPredicted RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 MUTYHQ9UIF7 546 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 KCNG2Q9UJ96 466 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PRELID3BQ9Y3B1 194 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 TEAD1P28347 426 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 CYB561P49447 251 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 TPPP2P59282 170 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 CST9Q5W186 159 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 GLIPR2Q9H4G4 154 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 OR7C2O60412 319 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
SPG11-210ENST00000558319 CPEP16870 476 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 SDHAP31040 664 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 S100A7P31151 101 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 PDCD1Q15116 288 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 ISL2Q96A47 359 aa12.74□□□□□ -0.37
SPG11-210ENST00000558319 TNFSF15O95150 251 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 OR5G3P0C626 314 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 ASCL1P50553 236 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 DPY19L2P2Q6ZN68 376 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 CNTN4Q8IWV2 1026 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 GABRG1Q8N1C3 465 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 PRAMEF25A6NGN4 478 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 MAP2K6P52564 334 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 RAB1AP62820 205 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TRMT12Q53H54 448 aaKnown RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 PRAMEF5Q5TYX0 476 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 PRAMEF6Q5VXH4 476 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 MSL2Q9HCI7 577 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 ZNF814B7Z6K7 855 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SULT1A3P0DMM9 295 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SULT1A4P0DMN0 295 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 DTYMKP23919 212 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 CALCRP30988 508 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 RAB7AP51149 207 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 CLDN20P56880 219 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 BTG2P78543 158 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TEX261Q6UWH6 196 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 CMTM4Q8IZR5 234 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 DTWD2Q8NBA8 298 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 OR52N1Q8NH53 320 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms