RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OR3A2P47893 321 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 SLC1A6P48664 564 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 ATP5IP56385 69 aaPredicted RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 GSCP56915 257 aaPredicted RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 XIAPP98170 497 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 CYCSP99999 105 aaKnown RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 OGDHQ02218 1023 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 DPYSL2Q16555 572 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 IL23RQ5VWK5 629 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 OR4C11Q6IEV9 310 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 ERASQ7Z444 233 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 CLDN19Q8N6F1 224 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 ZNF321PQ8N8H1 164 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 BHLHE23Q8NDY6 225 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 OR8K3Q8NH51 312 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 CLDND2Q8NHS1 167 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 LINC01006Q8NI28 216 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 RFT1Q96AA3 541 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 ULK4Q96C45 1275 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 CCDC42Q96M95 316 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 RBM14Q96PK6 669 aaKnown RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 BCL7BQ9BQE9 202 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 RACGAP1Q9H0H5 632 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 RIMS4Q9H426 269 aaPredicted RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 DCLRE1BQ9H816 532 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 METTL7AQ9H8H3 244 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 PNO1Q9NRX1 252 aaKnown RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 A0A087X0T9 212 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 LINC00854A0A1B0GVQ3 168 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 SIGLEC16A6NMB1 481 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 MPTX1A8MV57 137 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 F8VZ95 297 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 HAT1O14929 419 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CIB2O75838 187 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 FAM228BP0C875 321 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CETN2P41208 172 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 MAGEA1P43355 309 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 SLC3A1Q07837 685 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 PPIDQ08752 370 aaKnown RBP4.54□□□□□ -1.68
RTF1-204ENST00000558117 ASPHQ12797 758 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 PDK3Q15120 406 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 RCN1Q15293 331 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 SNAI3Q3KNW1 292 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CCSMST1Q4G0I0 132 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CCDC122Q5T0U0 273 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CROCCP3Q8IVE0 287 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 ZNF786Q8N393 782 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 FAM89BQ8N5H3 189 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 OR6K3Q8NGY3 331 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 C11orf45Q8TAV5 145 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 MIPOL1Q8TD10 442 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 UBTD2Q8WUN7 234 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 ELMO1Q92556 727 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 OSTF1Q92882 214 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 OMA1Q96E52 524 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 IMP4Q96G21 291 aaKnown RBP4.54□□□□□ -1.68
RTF1-204ENST00000558117 AGPAT1Q99943 283 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 ALG12Q9BV10 488 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 FAM96AQ9H5X1 160 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 MRPS30Q9NP92 439 aaKnown RBP4.54□□□□□ -1.68
RTF1-204ENST00000558117 RPRD1BQ9NQG5 326 aaKnown RBP4.54□□□□□ -1.68
RTF1-204ENST00000558117 ACOXLQ9NUZ1 547 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 TEX10Q9NXF1 929 aaPredicted RBP4.54□□□□□ -1.68
RTF1-204ENST00000558117 NUDT4Q9NZJ9 180 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 CRLS1Q9UJA2 301 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 GUCA1BQ9UMX6 200 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 FOXJ3Q9UPW0 622 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 AP4B1Q9Y6B7 739 aa4.54□□□□□ -1.68
RTF1-204ENST00000558117 TRAV18A0A075B6X5 111 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 KCNE1BA0A087WTH5 132 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 A0A0G2JMP0 313 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 A0A0X1KG70 313 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 C17orf105B2RV13 164 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 H0YL77 283 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 SOCS3O14543 225 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 ZSCAN12O43309 604 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 GALR3O60755 368 aaPredicted RBP4.53□□□□□ -1.68
RTF1-204ENST00000558117 SERPINA3P01011 423 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 SFTPBP07988 381 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 ANXA8P13928 327 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 GCKP35557 465 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 SLC6A8P48029 635 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 ETV1P50549 477 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 GNG11P61952 73 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 LMO4P61968 165 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 HERV-K104P63124 156 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 MYBPC1Q00872 1141 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 ARHGAP19Q14CB8 494 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 FASTKD3Q14CZ7 662 aaKnown RBP4.53□□□□□ -1.68
RTF1-204ENST00000558117 SPA17Q15506 151 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 TCHHL1Q5QJ38 904 aaPredicted RBP4.53□□□□□ -1.68
RTF1-204ENST00000558117 ANXA8L1Q5VT79 327 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 TIGD3Q6B0B8 471 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 FCRLAQ7L513 359 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 PSTKQ8IV42 348 aaKnown RBP4.53□□□□□ -1.68
RTF1-204ENST00000558117 SLC22A15Q8IZD6 547 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms