RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RPN2P04844 631 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GIG44P09565 113 aaPredicted RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TNFSF9P41273 254 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GPR1P46091 355 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 P2RY4P51582 365 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 EMP2P54851 167 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 DIO3P55073 304 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TAS2R19P59542 299 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 MAGOHP61326 146 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ATP6V0D1P61421 351 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 STXBP1P61764 594 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 POLR2GP62487 172 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZNF45Q02386 682 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 SP4Q02446 784 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GLO1Q04760 184 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 SLAMF1Q13291 335 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ARFRP1Q13795 201 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 FCN2Q15485 313 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 RPEL1Q2QD12 228 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA7BQ2TAP0 167 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PGGHGQ32M88 737 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TRMT5Q32P41 509 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 COQ5Q5HYK3 327 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PAMR1Q6UXH9 720 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 RFLNAQ6ZTI6 216 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TMEM135Q86UB9 458 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZNF547Q8IVP9 402 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZBED8Q8IZ13 594 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZNF525Q8N782 197 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 CYB561A3Q8NBI2 242 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 VN1R2Q8NFZ6 395 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 OR10R2Q8NGX6 335 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TYMSOSQ8TAI1 123 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PHOSPHO2Q8TCD6 241 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ESR2Q92731 530 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ISOC2Q96AB3 205 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 OTUB2Q96DC9 234 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PIK3IP1Q96FE7 263 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 FCRL1Q96LA6 429 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZNF251Q9BRH9 671 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 NICN1Q9BSH3 213 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GFRA4Q9GZZ7 299 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 OR51J1Q9H342 316 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ASB8Q9H765 288 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ZDHHC11Q9H8X9 412 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 UGT1A7Q9HAW7 530 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 UGT1A8Q9HAW9 530 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PLGRKTQ9HBL7 147 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 EML4Q9HC35 981 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 KCNJ16Q9NPI9 418 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TREX1Q9NSU2 369 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 PAQR5Q9NXK6 330 aaPredicted RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 SLC17A7Q9P2U7 560 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 XCL2Q9UBD3 114 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 CLCF1Q9UBD9 225 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 Q9UF83 564 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 MOKQ9UQ07 419 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 POFUT2Q9Y2G5 429 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 RCL1Q9Y2P8 373 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 SLC25A15Q9Y619 301 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 URGCP-MRPS24S4R325 110 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 RALGAPA1Q6GYQ0 2036 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 ANKRD30AQ9BXX3 1397 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 FHAD1B1AJZ9 1412 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 MAP3K4Q9Y6R4 1608 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 TMEM213A2RRL7 107 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA6L4A6NEF3 574 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 PRAMEF26H0Y7S4 382 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 RNASEK-C17orf49H0YIS7 233 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 K7EMT4 169 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 PLPP1O14494 284 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 RFXANKO14593 260 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 DENRO43583 198 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 ICOSLGO75144 302 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 SEMA3DO95025 777 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 ETHE1O95571 254 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 LSM8O95777 96 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 HBE1P02100 147 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 DCNP07585 359 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 SERPINA6P08185 405 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 GKN3PP0CG01 181 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 CALM1P0DP23 149 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 CALM2P0DP24 149 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 CALM3P0DP25 149 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 PSMB1P20618 241 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 COX7A1P24310 79 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 SLC26A3P40879 764 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 RFC3P40938 356 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 MEOX2P50222 304 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 PSMD7P51665 324 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 CCR8P51685 355 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 APOC4P55056 127 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 UCNP55089 124 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 ATP5J2P56134 94 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 OR2B6P58173 313 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 NUTF2P61970 127 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 MRPS25P82663 173 aaKnown RBP2.32□□□□□ -2.04
TRAV28-201ENST00000557548 PITPNAQ00169 270 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 REEP5Q00765 189 aa2.32□□□□□ -2.04
TRAV28-201ENST00000557548 TWF1Q12792 350 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms