RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SLC25A17O43808 307 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 OR2T1O43869 369 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SERPINI2O75830 405 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV1-46P01743 117 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 LCKP06239 509 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ETFAP13804 333 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 NQO1P15559 274 aaKnown RBP4.93□□□□□ -1.62
VPS33B-207ENST00000557470 S100A1P23297 94 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 HTR2AP28223 471 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 RBMXP38159 391 aaKnown RBP4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CRATP43155 626 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ATP4BP51164 291 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CRISP3P54108 245 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 MFAP4P55083 255 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 VSNL1P62760 191 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 PUDPQ08623 228 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 RBBP4Q09028 425 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF154Q13106 437 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 PMS2P3Q13401 168 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 KCNMB1Q16558 191 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM255AQ5JRV8 349 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CD276Q5ZPR3 534 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 C5orf46Q6UWT4 87 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 WDR88Q6ZMY6 472 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 KCTD20Q7Z5Y7 419 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 COMTD1Q86VU5 262 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SLC22A24Q8N4F4 322 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF781Q8N8C0 355 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM116Q8NCL8 245 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ICA1LQ8NDH6 482 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF519Q8TB69 540 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ST7LQ8TDW4 575 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SLC38A5Q8WUX1 472 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 UBLCP1Q8WVY7 318 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-207ENST00000557470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS33B-207ENST00000557470 C11orf40Q8WZ69 217 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 UBE2FQ969M7 185 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 TMIGD2Q96BF3 282 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ELMOD3Q96FG2 381 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM19Q96HH6 336 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ZIM3Q96PE6 472 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 OR52E6Q96RD3 313 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CGREF1Q99674 301 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SPATA5L1Q9BVQ7 753 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 PARD6BQ9BYG5 372 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CCDC134Q9H6E4 229 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 ARMC7Q9H6L4 198 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CDH20Q9HBT6 801 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 CALML5Q9NZT1 146 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 RPS6KB2Q9UBS0 482 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 RAB21Q9UL25 225 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 MMP24Q9Y5R2 645 aa4.93□□□□□ -1.62
VPS33B-207ENST00000557470 SOX21Q9Y651 276 aaPredicted RBP4.93□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV3OR16-10A0A075B7F0 116 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MDFIC2A0A1B0GVS7 189 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ZSCAN5BA6NJL1 495 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FAM90A7PA6NKC0 464 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF726A6NNF4 738 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF785A8K8V0 405 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FAM90A22PA8MWA6 464 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FAM90A12PA8MX19 464 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FAM90A23PA8MXZ1 464 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 A8MZ25 164 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TEX22C9J3V5 150 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 LRRN3E7EW58 273 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TRAPPC2LH3BP13 241 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 M0QYG6 137 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 PLPP3O14495 311 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 NDUFAB1O14561 156 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TM9SF1O15321 606 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SPRY3O43610 288 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FOXH1O75593 365 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MFN2O95140 757 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 KRT75O95678 551 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SNAP29O95721 258 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 GPANK1O95872 356 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 KNG1P01042 644 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 GASTP01350 101 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV3-13P01766 116 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 IGHMP01871 453 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 BGLAPP02818 100 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 BPGMP07738 259 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 VIMP08670 466 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ALDOCP09972 364 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV4-38-2P0DP08 117 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF12P17014 697 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM11P17152 192 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 LBPP18428 481 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 DRD4P21917 467 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 AHCYP23526 432 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 PCGF2P35227 344 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MPV17P39210 176 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CSNK1A1P48729 337 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CAMLGP49069 296 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 UCP2P55851 309 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 BIDP55957 195 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 DSTNP60981 165 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 STX1BP61266 288 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SEC61A1P61619 476 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CTAG1AP78358 180 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms