RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PAICSP22234 425 aaKnown RBP7.51□□□□□ -1.21
NEDD1-211ENST00000557454 ANP32AP39687 249 aaKnown RBP7.51□□□□□ -1.21
NEDD1-211ENST00000557454 RAB13P51153 203 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 RAB25P57735 213 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 CLRN1P58418 232 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 ELF3P78545 371 aaPredicted RBP7.51□□□□□ -1.21
NEDD1-211ENST00000557454 CALCOCO2Q13137 446 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 MAB21L1Q13394 359 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 MPPED2Q15777 294 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 PGS1Q32NB8 556 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 INTS11Q5TA45 600 aaKnown RBP7.51□□□□□ -1.21
NEDD1-211ENST00000557454 RNF220Q5VTB9 566 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 ANKRD46Q86W74 232 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 C10orf53Q8N6V4 93 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 BHLHE23Q8NDY6 225 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 P2RX4Q99571 388 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 ECSITQ9BQ95 431 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 SPATA9Q9BWV2 254 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 KCNK9Q9NPC2 374 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 RNF7Q9UBF6 113 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 RPS6KB2Q9UBS0 482 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 MARCOQ9UEW3 520 aaPredicted RBP7.51□□□□□ -1.21
NEDD1-211ENST00000557454 VPS13DQ5THJ4 4388 aa7.51□□□□□ -1.21
NEDD1-211ENST00000557454 TRAV38-1A0A0B4J264 116 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 A0A1B0GWA3 101 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 NDUFA2O43678 99 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 LYPLA1O75608 230 aaPredicted RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 SLC2A10O95528 541 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 CPSF4O95639 269 aaKnown RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 IGHG1P01857 330 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 NR2F1P10589 423 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 RAC2P15153 192 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 CHI3L1P36222 383 aaPredicted RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 RAD23AP54725 363 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 MRPS34P82930 218 aaKnown RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 SGCAQ16586 387 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 CEP85LQ5SZL2 805 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 C9orf66Q5T8R8 295 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 NXNQ6DKJ4 435 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 C1orf94Q6P1W5 598 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 COLCA1Q6ZS62 124 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 RIMKLAQ8IXN7 391 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 CLDN22Q8N7P3 220 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 NOXO1Q8NFA2 376 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 OR6S1Q8NH40 331 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 AENQ8WTP8 325 aaKnown RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 PTP4A1Q93096 173 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 ZNF582Q96NG8 517 aaPredicted RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 DUX3Q96PT4 197 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 METTL8Q9H825 291 aaKnown RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 C12orf10Q9HB07 376 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 SF3B6Q9Y3B4 125 aaKnown RBP7.5□□□□□ -1.21
NEDD1-211ENST00000557454 UGT2A1Q9Y4X1 527 aa7.5□□□□□ -1.21
NEDD1-211ENST00000557454 HSPG2P98160 4391 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 IGHV3OR15-7A0A075B7D8 119 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 IGKV1D-43A0A0B4J1Z2 117 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 PRR23D1E9PI22 279 aaPredicted RBP7.49□□□□□ -1.21
NEDD1-211ENST00000557454 H3BQF6 201 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 RNASET2O00584 256 aaKnown RBP7.49□□□□□ -1.21
NEDD1-211ENST00000557454 PRR23D2P0DMB1 279 aaPredicted RBP7.49□□□□□ -1.21
NEDD1-211ENST00000557454 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 PRPS1L1P21108 318 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 TUBG1P23258 451 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 FPR3P25089 353 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 MYCNOSP40205 109 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 MAPK11Q15759 364 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 HIST3H3Q16695 136 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 PDCD4Q53EL6 469 aaKnown RBP7.49□□□□□ -1.21
NEDD1-211ENST00000557454 C10orf128Q5T292 105 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 LRRC34Q8IZ02 419 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 OR52H1Q8NGJ2 320 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 OR5J2Q8NH18 312 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 ERGIC1Q969X5 290 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 ITCHQ96J02 903 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 CCDC115Q96NT0 180 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 EPYCQ99645 322 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 SLC35A5Q9BS91 424 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 TRIM36Q9NQ86 728 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 TUBG2Q9NRH3 451 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 PTTG3PQ9NZH4 202 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 KAAG1Q9UBP8 84 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 KCNG2Q9UJ96 466 aa7.49□□□□□ -1.21
NEDD1-211ENST00000557454 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 VGLL3A8MV65 326 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 NUDT19A8MXV4 375 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 AZIN1O14977 448 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 RNF13O43567 381 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 PEX11AO75192 247 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 OR6A2O95222 327 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 HCKP08631 526 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 HTR2AP28223 471 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 LAP3P28838 519 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 GP2P55259 537 aaKnown RBP7.48□□□□□ -1.21
NEDD1-211ENST00000557454 RPL23AP62750 156 aaKnown RBP7.48□□□□□ -1.21
NEDD1-211ENST00000557454 SLC7A5Q01650 507 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 RABL3Q5HYI8 236 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 ALG10BQ5I7T1 473 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms