RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ACHEP22303 614 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 CDAP32320 146 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 PTGS2P35354 604 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 MFAP5Q13361 173 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 TUSC1Q2TAM9 212 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 FAM74A1Q5RGS3 127 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 CARD17Q5XLA6 110 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 C12orf45Q8N5I9 185 aaPredicted RBP15.8■□□□□ 0.12
XRCC3-218ENST00000557439 STEAP2Q8NFT2 490 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 NUP50Q9UKX7 468 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 RHBDD3Q9Y3P4 386 aa15.8■□□□□ 0.12
XRCC3-218ENST00000557439 OR6C65A6NJZ3 312 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 LDLRAD4O15165 306 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 KCNAB3O43448 404 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 SRFP11831 508 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 UNC119Q13432 240 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 TDGQ13569 410 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 ZNF660Q6AZW8 331 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-218ENST00000557439 H1FNTQ75WM6 255 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-218ENST00000557439 GPAT4Q86UL3 456 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 PAQR4Q8N4S7 273 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-218ENST00000557439 OR10S1Q8NGN2 331 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 OR13C9Q8NGT0 318 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 KIF25Q9UIL4 384 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 GDF2Q9UK05 429 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-218ENST00000557439 VSIG4Q9Y279 399 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 A0A1W2PNR3 127 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 MFSD2BA6NFX1 497 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 TTRP02766 147 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 GIMD1P0DJR0 217 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 FSTP19883 344 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 DHRS2Q13268 280 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 C3orf33Q6P1S2 294 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 FJX1Q86VR8 437 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 WDR13Q9H1Z4 485 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 TTYH1Q9H313 450 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-218ENST00000557439 SLC17A5Q9NRA2 495 aa15.79■□□□□ 0.12
XRCC3-218ENST00000557439 HMSDA8MTL9 139 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 CDNFQ49AH0 187 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 STPG2Q8N412 459 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 ZNF454Q8N9F8 522 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 TMEM229BQ8NBD8 167 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 SLAMF6Q96DU3 332 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 POTEKPQ9BYX7 375 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 SEC61A2Q9H9S3 476 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 EML6Q6ZMW3 1958 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 EXPH5Q8NEV8 1989 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 TRBV11-1A0A0K0K1C0 115 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 TEX51A0A1B0GUA7 166 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 TMEM200CA6NKL6 621 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 NUDT21O43809 227 aaKnown RBP15.78■□□□□ 0.12
XRCC3-218ENST00000557439 GNB3P16520 340 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 C4BPBP20851 252 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 PRKXP51817 358 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 PAPD4Q6PIY7 484 aaKnown RBP15.78■□□□□ 0.12
XRCC3-218ENST00000557439 CFAP77Q6ZQR2 320 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 MRGPRFQ96AM1 343 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 NICN1Q9BSH3 213 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 KLRF1Q9NZS2 232 aa15.78■□□□□ 0.12
XRCC3-218ENST00000557439 NOP16Q9Y3C1 178 aaKnown RBP15.78■□□□□ 0.12
XRCC3-218ENST00000557439 ZNF814B7Z6K7 855 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 RAB27BO00194 218 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 RAMP1O60894 148 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 TPPPO94811 219 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 HLA-AP01891 365 aaKnown RBP15.77■□□□□ 0.12
XRCC3-218ENST00000557439 GK2Q14410 553 aaPredicted RBP15.77■□□□□ 0.12
XRCC3-218ENST00000557439 PTCRAQ6ISU1 281 aaPredicted RBP15.77■□□□□ 0.12
XRCC3-218ENST00000557439 ZNF574Q6ZN55 896 aaPredicted RBP15.77■□□□□ 0.12
XRCC3-218ENST00000557439 RHOUQ7L0Q8 258 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 ANKRD37Q7Z713 158 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 TRAPPC6BQ86SZ2 158 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 LYPD6Q86Y78 171 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 OR2I1PQ8NGU4 316 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 SCARB1Q8WTV0 552 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 TMEM234Q8WY98 164 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 CHST11Q9NPF2 352 aa15.77■□□□□ 0.12
XRCC3-218ENST00000557439 ANKUB1A6NFN9 424 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 NUPL2O15504 423 aaKnown RBP15.77■□□□□ 0.11
XRCC3-218ENST00000557439 CXADRP78310 365 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 GFOD2Q3B7J2 385 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 ZNF584Q8IVC4 421 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 THRSPQ92748 146 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 C1orf198Q9H425 327 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 AKIRIN1Q9H9L7 192 aaPredicted RBP15.77■□□□□ 0.11
XRCC3-218ENST00000557439 SERINC1Q9NRX5 453 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 FAM206AQ9NX38 181 aa15.77■□□□□ 0.11
XRCC3-218ENST00000557439 SDK2Q58EX2 2172 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 FAM25EA8MYX2 175 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 GDF9O60383 454 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 B3GALNT1O75752 331 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 GLB1P16278 677 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 ABOP16442 354 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 BTN1A1Q13410 526 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 ZNF813Q6ZN06 617 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 BEST3Q8N1M1 668 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 OR51E1Q8TCB6 317 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 ST8SIA4Q92187 359 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 FSCN3Q9NQT6 498 aa15.76■□□□□ 0.11
XRCC3-218ENST00000557439 B3GAT1Q9P2W7 334 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms