RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 SNAPINO95295 136 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 IFNA6P05013 189 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 DCDP81605 110 aaKnown RBP14.57□□□□□ -0.08
SHMT2-231ENST00000557433 SPOCK1Q08629 439 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 FAM189A2Q15884 450 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 MOGAT2Q3SYC2 334 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 TMEM151BQ8IW70 566 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 BAP18Q8IXM2 172 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 SLC22A24Q8N4F4 322 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 OR51A2Q8NGJ7 313 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 FGF14Q92915 247 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF524Q96C55 264 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 MMP26Q9NRE1 261 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 EMC9Q9Y3B6 208 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 MPDZO75970 2070 aa14.57□□□□□ -0.08
SHMT2-231ENST00000557433 TMED7-TICAM2A0A0A6YYA0 188 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 FITM1A5D6W6 292 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 C10orf142B7Z368 130 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CCSO14618 274 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 AHSA1O95433 338 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 IGKV3-11P04433 115 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CTSEP14091 401 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 BLKP51451 505 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 MMP16P51512 607 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SLC26A5P58743 744 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 S100A12P80511 92 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 NKPD1Q17RQ9 610 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 C1orf140Q5VVS0 124 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 GRINAQ7Z429 371 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CD163Q86VB7 1156 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 PUSL1Q8N0Z8 303 aaKnown RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SLC22A18ASQ8N1D0 253 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 ACBD4Q8NC06 268 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 PPP1R14AQ96A00 147 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SLC25A36Q96CQ1 311 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CNTNAP3BQ96NU0 1288 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SCGB3A2Q96PL1 93 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 UCK1Q9HA47 277 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 TMED7Q9Y3B3 224 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 FAM25EA8MYX2 175 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 ERCC1P07992 297 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CHRM2P08172 466 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 PVALBP20472 110 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 GABRA4P48169 554 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 EIF5AP63241 154 aaKnown RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 ZP4Q12836 540 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 AIMP2Q13155 320 aaKnown RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 ATXN7L3Q14CW9 347 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 STK11Q15831 433 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 PARGQ86W56 976 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 ZNF761Q86XN6 746 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SLC26A10Q8NG04 563 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 OR4S1Q8NGB4 309 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 OR4D6Q8NGJ1 314 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SEC11CQ9BY50 192 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 TBL1XR1Q9BZK7 514 aa14.56□□□□□ -0.08
SHMT2-231ENST00000557433 TCEAL2Q9H3H9 227 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 PNO1Q9NRX1 252 aaKnown RBP14.56□□□□□ -0.08
SHMT2-231ENST00000557433 SPTY2D1-AS1A0A0U1RR47 76 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 TMEM269A0A1B0GVZ9 245 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 PQLC2LA1A4F0 135 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 CEACAM18A8MTB9 384 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 PLGP00747 810 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-231ENST00000557433 HEXAP06865 529 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 LYL1P12980 280 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 CD1CP29017 333 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 CCR5P51681 352 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 GPR85P60893 370 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 QRFPP83859 136 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 BEX5Q5H9J7 111 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 NKAPLQ5M9Q1 402 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 HOGA1Q86XE5 327 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 LDLRAD3Q86YD5 345 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 MRGPRFQ96AM1 343 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-231ENST00000557433 ZMAT3Q9HA38 289 aaKnown RBP14.55□□□□□ -0.08
SHMT2-231ENST00000557433 BIN3Q9NQY0 253 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 LANCL2Q9NS86 450 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 ANAPC10Q9UM13 185 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 SLC5A6Q9Y289 635 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 DOCK8Q8NF50 2099 aa14.55□□□□□ -0.08
SHMT2-231ENST00000557433 C5orf51A6NDU8 294 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 FADS1O60427 444 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 TSPAN2O60636 221 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 SEMA4FO95754 770 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 NUDT14O95848 222 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CSN2P05814 226 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 MYOGP15173 224 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 VAMP1P23763 118 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 CTHP32929 405 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 SLC6A9P48067 706 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 DAP3P51398 398 aaKnown RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 TDGQ13569 410 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 ELAVL1Q15717 326 aaKnown RBP14.54□□□□□ -0.08
SHMT2-231ENST00000557433 C1QL3Q5VWW1 255 aa14.54□□□□□ -0.08
SHMT2-231ENST00000557433 HLA-DQA1Q5Y7H0 255 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms