RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CD14P08571 375 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 GPR85P60893 370 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SH3BP2P78314 561 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 PRAMEF20Q5VT98 475 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 OR10AD1Q8NGE0 317 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ST8SIA2Q92186 375 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 NSUN5Q96P11 429 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 NUDT16L1Q9BRJ7 211 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 PITPNC1Q9UKF7 332 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SELENOFO60613 162 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 KLRK1P26718 216 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 LBX2Q6XYB7 198 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SLC38A9Q8NBW4 561 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 RTN4IP1Q8WWV3 396 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 GDF2Q9UK05 429 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 COL14A1Q05707 1796 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 RRP8O43159 456 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF888P0CJ79 500 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 PTNP21246 168 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ARSDP51689 593 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CPPED1Q9BRF8 314 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 YLPM1P49750 1951 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 MS4A18H0YCH9 400 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 M0R3E3 92 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 AQP7O14520 342 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ACHEP22303 614 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 KIR2DL1P43626 348 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 KIR2DL2P43627 348 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 MS4A18Q3C1V0 323 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 OR52R1Q8NGF1 315 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 HGDQ93099 445 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SUCNR1Q9BXA5 334 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 MARCH5Q9NX47 278 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CLDND1Q9NY35 253 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 NFS1Q9Y697 457 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FPR3P25089 353 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 IZUMO4Q1ZYL8 232 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 RPS26P11Q5JNZ5 115 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CBLL1Q75N03 491 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 KLRC4-KLRK1H3BQV0 150 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SOCS6O14544 535 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TBX19O60806 448 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CPEP16870 476 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 FCRL6Q6DN72 434 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ARRDC1Q8N5I2 433 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 GPR32P1Q8NGA4 272 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LILRB1Q8NHL6 650 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 C11orf40Q8WZ69 217 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SPNS1Q9H2V7 528 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 PISDQ9UG56 409 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SLC22A13Q9Y226 551 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 MED1Q15648 1581 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TCRBV21S2A2A0A5A6 115 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 FCN1O00602 326 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LAMTOR5O43504 91 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ITGB7P26010 798 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CTF1Q16619 201 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CALHM3Q86XJ0 350 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 METTL27Q8N6F8 245 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ARRDC3Q96B67 414 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM231Q9H6L2 316 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 KDM4EB2RXH2 506 aaPredicted RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 NPY4RP50391 375 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SSR4P51571 173 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 EDDM3BP56851 147 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 EGR3Q06889 387 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM128Q5BJH2 165 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LRRC3BQ96PB8 259 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RAB40CQ96S21 281 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 UTP23Q9BRU9 249 aaKnown RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 LHX3Q9UBR4 397 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CDC42EP3Q9UKI2 254 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 NEURL4Q96JN8 1562 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SOD2P04179 222 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 PGA4P0DJD7 388 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 PGA5P0DJD9 388 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 FCGR2CP31995 323 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ASCL1P50553 236 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RPS25P62851 125 aaKnown RBP8.11□□□□□ -1.11
SYNE3-205ENST00000557275 IHHQ14623 411 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 Q6ZVL8 140 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 OR5AS1Q8N127 324 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RELTQ969Z4 430 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ACOT4Q8N9L9 421 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 ABHD4Q8TB40 342 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 SPHK2Q9NRA0 654 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 PSORS1C1Q9UIG5 152 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 VDAC3Q9Y277 283 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 CORTO00230 105 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 EPHA2P29317 976 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 PHLDA2Q53GA4 152 aa8.11□□□□□ -1.11
SYNE3-205ENST00000557275 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms