RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SLC27A4Q6P1M0 643 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 LRRN1Q6UXK5 716 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 RFPL4BQ6ZWI9 263 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 NKAIN4Q8IVV8 208 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 FAM156AQ8NDB6 213 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 OR10A6Q8NH74 314 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 AKR7LQ8NHP1 331 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 C22orf15Q8WYQ4 148 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 THOC1Q96FV9 657 aaKnown RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 PRDM13Q9H4Q3 707 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 UNKLQ9H9P5 680 aaKnown RBP7.28□□□□□ -1.24
VRK1-206ENST00000557222 MMP26Q9NRE1 261 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 MRGBPQ9NV56 204 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 OR5V1Q9UGF6 321 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 RIMS3Q9UJD0 308 aa7.28□□□□□ -1.24
VRK1-206ENST00000557222 IGKV1D-43A0A0B4J1Z2 117 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 NGFP01138 241 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 NPPAP01160 153 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 MSR1P21757 451 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 LAP3P28838 519 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 IFNA8P32881 189 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 CRYBA2P53672 197 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ERVK-25P63136 954 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 SCRN3Q0VDG4 424 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ST3GAL3Q11203 375 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 NFYCQ13952 458 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 CYLC2Q14093 348 aaPredicted RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 SELPLGQ14242 412 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 SLC9A3R2Q15599 337 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ZNF362Q5T0B9 420 aaPredicted RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 METTL21CQ5VZV1 264 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ERICH5Q6P6B1 374 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 C16orf87Q6PH81 154 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 MOSPD2Q8NHP6 518 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 PFN4Q8NHR9 129 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 TMEM255BQ8WV15 326 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 GEMIN6Q8WXD5 167 aaKnown RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 NSMAFQ92636 917 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 PTP4A1Q93096 173 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 UPRTQ96BW1 309 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 HAVCR1Q96D42 359 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 C1orf147Q96MC9 270 aaPredicted RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 DCLRE1CQ96SD1 692 aaKnown RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 SIKE1Q9BRV8 207 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 MS4A7Q9GZW8 240 aaPredicted RBP7.27□□□□□ -1.25
VRK1-206ENST00000557222 MSL2Q9HCI7 577 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 C20orf141Q9NUB4 165 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 MIOXQ9UGB7 285 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 ATPIF1Q9UII2 106 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 PPP1R3CQ9UQK1 317 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 SH3GLB1Q9Y371 365 aa7.27□□□□□ -1.25
VRK1-206ENST00000557222 TMEM178BH3BS89 294 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 ABHD16AO95870 558 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 PLATP00750 562 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 WNT2P09544 360 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 CD80P33681 288 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 SLC9A3P48764 834 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 RGS6P49758 472 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 CTXN1P60606 82 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 PAX2Q02962 417 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 FMODQ06828 376 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 PIN1Q13526 163 aaPredicted RBP7.26□□□□□ -1.25
VRK1-206ENST00000557222 ENDOGQ14249 297 aaKnown RBP7.26□□□□□ -1.25
VRK1-206ENST00000557222 ZMYND11Q15326 602 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 ZNF181Q2M3W8 571 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 SPRNQ5BIV9 151 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 COQ5Q5HYK3 327 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 NANOGP8Q6NSW7 305 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 ZNF774Q6NX45 483 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 LEG1Q6P5S2 330 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 BTNL3Q6UXE8 466 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 CALHM3Q86XJ0 350 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 RNF113BQ8IZP6 322 aaKnown RBP7.26□□□□□ -1.25
VRK1-206ENST00000557222 LRRC75AQ8NAA5 344 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 PCYOX1LQ8NBM8 494 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 OR8J3Q8NGG0 315 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 OR52E2Q8NGJ4 325 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 OR5L1Q8NGL2 311 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 PLEKHA8Q96JA3 519 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
VRK1-206ENST00000557222 SIGLEC11Q96RL6 698 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 POLE4Q9NR33 117 aa7.26□□□□□ -1.25
VRK1-206ENST00000557222 KIR2DS1A0A191URI9 304 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 CEACAM18A8MTB9 384 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 SGCEO43556 437 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 RPL15P61313 204 aaKnown RBP7.25□□□□□ -1.25
VRK1-206ENST00000557222 DEFA6Q01524 100 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 GUCY1A3Q02108 690 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 BEND6Q5SZJ8 279 aaPredicted RBP7.25□□□□□ -1.25
VRK1-206ENST00000557222 FBXW12Q6X9E4 464 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 Q6ZR03 302 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 BCL6BQ8N143 479 aaPredicted RBP7.25□□□□□ -1.25
VRK1-206ENST00000557222 PARP8Q8N3A8 854 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 TMEM86BQ8N661 226 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 OR2Z1Q8NG97 314 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 OR13G1Q8NGZ3 307 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 ITLN1Q8WWA0 313 aa7.25□□□□□ -1.25
VRK1-206ENST00000557222 RAB40AQ8WXH6 277 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms