RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SLC18B1Q6NT16 456 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 TMEM154Q6P9G4 183 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF786Q8N393 782 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 SLC37A3Q8NCC5 494 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF540Q8NDQ6 660 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 PROKR2Q8NFJ6 384 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 UBASH3BQ8TF42 649 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 DCLRE1CQ96SD1 692 aaKnown RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 COQ7Q99807 217 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 RBM4Q9BWF3 364 aaKnown RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 OR2J1Q9GZK6 312 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 BPESC1Q9GZL8 116 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 HINT3Q9NQE9 182 aaKnown RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 CGGBP1Q9UFW8 167 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 TANC2Q9HCD6 1990 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 RIIAD1A6NNX1 92 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 H3BN98 237 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 CD5LO43866 347 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 NCR1O76036 304 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 HLA-DQA2P01906 255 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 HPXP02790 462 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF3P17036 446 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 TUBG1P23258 451 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 PYCR1P32322 319 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 GRK5P34947 590 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 GGT2P36268 569 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 MPV17P39210 176 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 RGS6P49758 472 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 SLC25A1P53007 311 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 MRPS11P82912 194 aaKnown RBP9.85□□□□□ -0.83
SLIRP-205ENST00000556310 GGTLC2Q14390 218 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 ALKBH6Q3KRA9 238 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 TMEM255AQ5JRV8 349 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 ELFN2Q5R3F8 820 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 CORO6Q6QEF8 472 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 CFAP77Q6ZQR2 320 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 HS3ST5Q8IZT8 346 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 OR9Q1Q8NGQ5 310 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 SLC7A6Q92536 515 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 COG8Q96MW5 612 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 NMNAT2Q9BZQ4 307 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF556Q9HAH1 456 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 TUBG2Q9NRH3 451 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 CMC2Q9NRP2 79 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 MRPL22Q9NWU5 206 aaKnown RBP9.85□□□□□ -0.83
SLIRP-205ENST00000556310 NKIRAS2Q9NYR9 191 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 CYB5R1Q9UHQ9 305 aa9.85□□□□□ -0.83
SLIRP-205ENST00000556310 IGHV4-61A0A0C4DH41 118 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 PLSCR5A0PG75 271 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 TLX2O43763 284 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-205ENST00000556310 TIPRLO75663 272 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 DBHP09172 617 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ANXA8P13928 327 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-205ENST00000556310 SPI1P17947 270 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ACHEP22303 614 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF81P51508 661 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 MMP15P51511 669 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 PPP2R2BQ00005 443 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 TNP2Q05952 138 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ECH1Q13011 328 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 RIN1Q13671 783 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ZMAT1Q5H9K5 638 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 C1orf146Q5VVC0 180 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 SLC27A4Q6P1M0 643 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 SHQ1Q6PI26 577 aaKnown RBP9.84□□□□□ -0.83
SLIRP-205ENST00000556310 LINC00346Q8IVM7 164 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 IQCF1Q8N6M8 205 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 OR2AJ1Q8NGZ0 328 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 DNAJC9Q8WXX5 260 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 RDH5Q92781 318 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
SLIRP-205ENST00000556310 NRBF2Q96F24 287 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 ATF6BQ99941 703 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 CDADC1Q9BWV3 514 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 POFUT1Q9H488 388 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 CHODLQ9H9P2 273 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 NTN4Q9HB63 628 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 CYSLTR2Q9NS75 346 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 GRIP1Q9Y3R0 1128 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 COMMD3-BMI1R4GMX3 469 aa9.84□□□□□ -0.83
SLIRP-205ENST00000556310 MALRD1Q5VYJ5 2156 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 TVP23AA6NH52 213 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ZSCAN5BA6NJL1 495 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 INAFM1C9JVW0 142 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 LYNX1G3V0Z9 82 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 GYPBP06028 91 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ADH4P08319 380 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 TACSTD2P09758 323 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 LYNX1P0DP58 116 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 OSMP13725 252 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF823P16415 610 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF23P17027 643 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 KITLGP21583 273 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 FMO3P31513 532 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 LIPAP38571 399 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 MAGEB1P43366 347 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 BLVRAP53004 296 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms