RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	FBXO17	Q96EF6	278 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	PERP	Q96FX8	193 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC25A44	Q96H78	314 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	RITA1	Q96K30	269 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	C7orf34	Q96L11	122 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SAMD8	Q96LT4	415 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ADAD1	Q96M93	576 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	MUS81	Q96NY9	551 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ERMAP	Q96PL5	475 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CCL19	Q99731	98 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SH3GL3	Q99963	347 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	KATNB1	Q9BVA0	655 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CADM1	Q9BY67	442 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	LINC00470	Q9BZP3	86 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	C1orf21	Q9H246	121 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR51B6	Q9H340	312 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TXNIP	Q9H3M7	391 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	YY1AP1	Q9H869	796 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	REEP1	Q9H902	201 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CCNB1IP1	Q9NPC3	277 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	IL1RAP	Q9NPH3	570 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	GLTP	Q9NZD2	209 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	B3GAT1	Q9P2W7	334 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	MOK	Q9UQ07	419 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMEM5	Q9Y2B1	443 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	APC	P25054	2843 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CR1	P17927	2039 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	LOC102725191	A0A1B0GVB3	256 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	IQCM	A0A1B0GVH7	501 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HTR3E	A5X5Y0	456 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288		A6NIZ1	184 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF99	A8MXY4	864 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CDC42EP2	O14613	210 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HS3ST1	O14792	307 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	DHH	O43323	396 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	TRAF3IP2	O43734	574 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC16A7	O60669	478 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	KRT36	O76013	467 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF432	O94892	652 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	NDUFB2	O95178	105 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC2A10	O95528	541 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	PPP1R3D	O95685	299 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RAB36	O95755	333 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	REN	P00797	406 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HLA-DQA2	P01906	255 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR8G3P	P0DMU2	310 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	PRKACG	P22612	351 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	PTAFR	P25105	342 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CCKAR	P32238	428 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RPS6KA3	P51812	740 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ARHGDIA	P52565	204 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CDH11	P55287	796 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SH3BGR	P55822	239 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RAP1B	P61224	184 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RAP1A	P62834	184 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	GALK2	Q01415	458 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HSF2	Q03933	536 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RUNX1T1	Q06455	604 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	FMOD	Q06828	376 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SPOCK1	Q08629	439 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	BNIP1	Q12981	228 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CARTPT	Q16568	116 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	GSG1	Q2KHT4	349 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	MTX3	Q5HYI7	312 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CLEC12A	Q5QGZ9	265 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	C1orf146	Q5VVC0	180 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OTP	Q5XKR4	325 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR2T5	Q6IEZ7	315 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMPRSS11F	Q6ZWK6	438 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC16A14	Q7RTX9	510 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HDDC2	Q7Z4H3	204 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	TSEN54	Q7Z6J9	526 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	MDP1	Q86V88	176 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	WDFY1	Q8IWB7	410 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SKA3	Q8IX90	412 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMEM123	Q8N131	208 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC22A24	Q8N4F4	322 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CLDN22	Q8N7P3	220 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ADPRHL1	Q8NDY3	354 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR2T29	Q8NH02	315 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR4K13	Q8NH42	304 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	GIPC3	Q8TF64	312 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SMAP2	Q8WU79	429 aa	Predicted RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CANT1	Q8WVQ1	401 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	HDAC2	Q92769	488 aa	Known RBP	4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMEM54	Q969K7	222 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	PIGT	Q969N2	578 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	RASD2	Q96D21	266 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ASB9	Q96DX5	294 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	LRR1	Q96L50	414 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288		Q96M85	177 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF570	Q96NI8	536 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC38A2	Q96QD8	506 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	CHID1	Q9BWS9	393 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR10A4	Q9H209	315 aa		4.03	□□□□□ -1.76
ATXN3-238	ENST00000556288	LRMDA	Q9H2I8	198 aa		4.03	□□□□□ -1.76

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