RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TIMM23BQ5SRD1 257 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 LIPNQ5VXI9 398 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF774Q6NX45 483 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF544Q6NX49 715 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 XKRXQ6PP77 449 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 TUBA1AQ71U36 451 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 VASH1Q7L8A9 365 aaPredicted RBP9.63□□□□□ -0.87
TMEM260-208ENST00000555905 KLBQ86Z14 1044 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 OR10S1Q8NGN2 331 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 OR1F12Q8NHA8 337 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 FGFBP3Q8TAT2 258 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 MUL1Q969V5 352 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 SPTSSAQ969W0 71 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 S100PBPQ96BU1 408 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 MUCL1Q96DR8 90 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 COG8Q96MW5 612 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 OR5M11Q96RB7 305 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 ACTR6Q9GZN1 396 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 WNT5BQ9H1J7 359 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 NIPAL2Q9H841 368 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 MOV10Q9HCE1 1003 aaKnown RBP9.63□□□□□ -0.87
TMEM260-208ENST00000555905 KCNJ16Q9NPI9 418 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
TMEM260-208ENST00000555905 DDX28Q9NUL7 540 aaKnown RBP9.63□□□□□ -0.87
TMEM260-208ENST00000555905 ACOXLQ9NUZ1 547 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 B3GNT2Q9NY97 397 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF224Q9NZL3 707 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 FBXL3Q9UKT7 428 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 LRP12Q9Y561 859 aa9.63□□□□□ -0.87
TMEM260-208ENST00000555905 CACNA1CQ13936 2221 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 OR6C6A6NF89 314 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 SYNGR3O43761 229 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 INMTO95050 263 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 APOC1P02654 83 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 DCTDP32321 178 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 HTR5AP47898 357 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 GALK2Q01415 458 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 BDH1Q02338 343 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 ACSM1Q08AH1 577 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF829Q3KNS6 432 aaPredicted RBP9.62□□□□□ -0.87
TMEM260-208ENST00000555905 FBXL19-AS1Q494R0 122 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 CCDC58Q4VC31 144 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 SSX8Q7RTT4 187 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 MDP1Q86V88 176 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 WDR31Q8NA23 367 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF485Q8NCK3 441 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 HSD17B8Q92506 261 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 RNASE6Q93091 150 aaKnown RBP9.62□□□□□ -0.87
TMEM260-208ENST00000555905 PELI1Q96FA3 418 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 MGLLQ99685 303 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 KCNJ15Q99712 375 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 COQ7Q99807 217 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 OR10A4Q9H209 315 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 ISYNA1Q9NPH2 558 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 ATPIF1Q9UII2 106 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 PCNX1Q96RV3 2341 aa9.62□□□□□ -0.87
TMEM260-208ENST00000555905 A0A1W2PR80 420 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 NKX2-6A6NCS4 301 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF503-AS2A6NEH8 195 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 F5H5K5 113 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ZG16O60844 167 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ABHD16AO95870 558 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 SERPINA5P05154 406 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 TFAP2AP05549 437 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 COX5BP10606 129 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 CBR1P16152 277 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 PPP3CBP16298 524 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 STOMP27105 288 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 APLNRP35414 380 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 PSMB10P40306 273 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 TGM4P49221 684 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 GDI2P50395 445 aaKnown RBP9.61□□□□□ -0.87
TMEM260-208ENST00000555905 TPTEP56180 551 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 MLLT11Q13015 90 aaPredicted RBP9.61□□□□□ -0.87
TMEM260-208ENST00000555905 BLMHQ13867 455 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 RAB39AQ14964 217 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 PPA1Q15181 289 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ARMCX4Q5H9R4 360 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 SYT6Q5T7P8 510 aaPredicted RBP9.61□□□□□ -0.87
TMEM260-208ENST00000555905 RPL22L1Q6P5R6 122 aaKnown RBP9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF808Q8N4W9 903 aaPredicted RBP9.61□□□□□ -0.87
TMEM260-208ENST00000555905 ZNF283Q8N7M2 679 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 UFD1Q92890 307 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 NOX3Q9HBY0 568 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 GTF2A1LQ9UNN4 478 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 R4GMQ9 66 aa9.61□□□□□ -0.87
TMEM260-208ENST00000555905 TMEM269A0A1B0GVZ9 245 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 E9PI62 339 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 LOC110117498-PIK3R3F6TDL0 507 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 M0R135 149 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 AGFG2O95081 481 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 CLDN14O95500 239 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 CELP19835 753 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 APEX1P27695 318 aaKnown RBP9.6□□□□□ -0.87
TMEM260-208ENST00000555905 TTKP33981 857 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 SLC6A9P48067 706 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 ALDH3B2P48448 385 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 CX3CR1P49238 355 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 PRKXP51817 358 aa9.6□□□□□ -0.87
TMEM260-208ENST00000555905 GTF2A1P52655 376 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms