RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 STARD10Q9Y365 291 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 GRIP1Q9Y3R0 1128 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 LHFPL6Q9Y693 200 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TANC2Q9HCD6 1990 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 A0A1B0GWJ7 208 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 RNF212BA8MTL3 300 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 TNFRSF11BO00300 401 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 BHLHE40O14503 412 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 RER1O15258 196 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 MPZL1O95297 269 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 ATP6V1B2P21281 511 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 CPT2P23786 658 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 FAM98BQ52LJ0 330 aaKnown RBP10.04□□□□□ -0.8
VRK1-204ENST00000555351 SLC27A4Q6P1M0 643 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 CYP2R1Q6VVX0 501 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 RASSF6Q6ZTQ3 369 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 PEG10Q86TG7 708 aaKnown RBP10.04□□□□□ -0.8
VRK1-204ENST00000555351 OR4C15Q8NGM1 316 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 OR4K13Q8NH42 304 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
VRK1-204ENST00000555351 ASB9Q96DX5 294 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 TSSK2Q96PF2 358 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 DGCR6LQ9BY27 220 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 ZNF665Q9H7R5 613 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
VRK1-204ENST00000555351 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 CYB5R1Q9UHQ9 305 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 WIPI2Q9Y4P8 454 aa10.04□□□□□ -0.8
VRK1-204ENST00000555351 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 OR6C68A6NDL8 312 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 FAM157AC9JC47 383 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 J3QLI3 93 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 WNT9BO14905 357 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 DEAF1O75398 565 aaPredicted RBP10.03□□□□□ -0.8
VRK1-204ENST00000555351 CCNB2O95067 398 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 FSTL3O95633 263 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 IGHV2-5P01817 119 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 T-ENOLP0DO92 83 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 SELEP16581 610 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 GATA3P23771 443 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 CENPAP49450 140 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 TNFAIP6P98066 277 aaPredicted RBP10.03□□□□□ -0.8
VRK1-204ENST00000555351 TRAP1Q12931 704 aaKnown RBP10.03□□□□□ -0.8
VRK1-204ENST00000555351 MICAQ29983 383 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 LIPNQ5VXI9 398 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 OR2T5Q6IEZ7 315 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 SLC18B1Q6NT16 456 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 CD300LDQ6UXZ3 194 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 LNX2Q8N448 690 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 OR2AJ1Q8NGZ0 328 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 OR2T4Q8NH00 348 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 OR2T29Q8NH02 315 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 CCL17Q92583 94 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 CMBLQ96DG6 245 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 DDOQ99489 341 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 BTBD10Q9BSF8 475 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 C1QTNF5Q9BXJ0 243 aa10.03□□□□□ -0.8
VRK1-204ENST00000555351 RPRD1BQ9NQG5 326 aaKnown RBP10.03□□□□□ -0.8
VRK1-204ENST00000555351 PPIAL4EA0A075B759 164 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 PPIAL4CA0A0B4J2A2 164 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 ARRDC5A6NEK1 342 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 PPIAL4DF5H284 164 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 PPIAL4FP0DN26 164 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 RAP2AP10114 183 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 GGT2P36268 569 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 SRP14P37108 136 aaKnown RBP10.02□□□□□ -0.81
VRK1-204ENST00000555351 BLVRAP53004 296 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 MVKQ03426 396 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.02□□□□□ -0.81
VRK1-204ENST00000555351 RSPO1Q2MKA7 263 aaPredicted RBP10.02□□□□□ -0.81
VRK1-204ENST00000555351 ZNF362Q5T0B9 420 aaPredicted RBP10.02□□□□□ -0.81
VRK1-204ENST00000555351 Q6ZR03 302 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 ZNF283Q8N7M2 679 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 SDR9C7Q8NEX9 313 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 OR8G5Q8NG78 346 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 OR52E2Q8NGJ4 325 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 OR13G1Q8NGZ3 307 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 ATF6BQ99941 703 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 CDADC1Q9BWV3 514 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 POFUT1Q9H488 388 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 REEP1Q9H902 201 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 MSL2Q9HCI7 577 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 CACNG2Q9Y698 323 aa10.02□□□□□ -0.81
VRK1-204ENST00000555351 A0A0G2JMP0 313 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 A0A0X1KG70 313 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 AQP12BA6NM10 295 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 IQCF6A8MYZ5 107 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 ACOT8O14734 319 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 PNPP00491 289 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 GASTP01350 101 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 DBHP09172 617 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 ACSM4P0C7M7 580 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 ZNF823P16415 610 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 SLC25A1P53007 311 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 MS4A2Q01362 244 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms