RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ACTBP60709 375 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SKP1P63208 163 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ACTG1P63261 375 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 FAM3AP98173 230 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 C2orf76Q3KRA6 126 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PLAC9Q5JTB6 97 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 RIPPLY2Q5TAB7 128 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 DCAF12L2Q5VW00 463 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PGAP1Q75T13 922 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM200AQ86VY9 491 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OOSP2Q86WS3 158 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 KDM8Q8N371 416 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 GTPBP8Q8N3Z3 284 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TOMM5Q8N4H5 51 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LRRC17Q8N6Y2 441 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 NOXO1Q8NFA2 376 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR13H1Q8NG92 308 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR51G2Q8NGK0 314 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR13C5Q8NGS8 318 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 OR4C6Q8NH72 309 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SYNPRQ8TBG9 265 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 WDR89Q96FK6 387 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 MARS2Q96GW9 593 aaKnown RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 Q96M66 194 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF587Q96SQ5 575 aaPredicted RBP3.04□□□□□ -1.92
SEC23A-207ENST00000554615 INTS14Q96SY0 518 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 MAP3K3Q99759 626 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 TMED9Q9BVK6 235 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 SRMSQ9H3Y6 488 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 LINC00574Q9H8X3 128 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 NOX3Q9HBY0 568 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 PARP11Q9NR21 331 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 GAB2Q9UQC2 676 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 IER3IP1Q9Y5U9 82 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 MTCH2Q9Y6C9 303 aa3.04□□□□□ -1.92
SEC23A-207ENST00000554615 A0A087WWC5 75 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 KPNA3O00505 521 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TAAR5O14804 337 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SFT2D2O95562 160 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 KRT8P05787 483 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 MMP7P09237 267 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TMIGD3P0DMS9 266 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SRFP11831 508 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 MAGP20916 626 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 GIFP27352 417 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 AGTR1P30556 359 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SOAT1P35610 550 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TAS2R31P59538 309 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 PAX2Q02962 417 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 INPP5JQ15735 1006 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TRIQKQ629K1 86 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SPAG16Q8N0X2 631 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ARL14Q8N4G2 192 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SAMD12Q8N8I0 201 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 OR5AP2Q8NGF4 316 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CCL4L1Q8NHW4 92 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ENKURQ8TC29 256 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 PAQR8Q8TEZ7 354 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 DIRC2Q96SL1 478 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CACNG6Q9BXT2 260 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CHST6Q9GZX3 395 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 FXYD6Q9H0Q3 95 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 Q9N2J8 555 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CHST11Q9NPF2 352 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SUSD2Q9UGT4 822 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 NDRG3Q9UGV2 375 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CYP8B1Q9UNU6 501 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 HDGFL3Q9Y3E1 203 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 hCG_2014768A0A024R1R8 64 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM218A2RU14 115 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF891A8MT65 544 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 A8MX80 341 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 D6RAR5 112 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 H0YIZ8 118 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 UBE2CO00762 179 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 TOR1AO14656 332 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 KDM4BO94953 1096 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CELA2BP08218 269 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 OR4E1P0C645 316 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 RCC1P18754 421 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 GABRA3P34903 492 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 HOXA1P49639 335 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SULT1A2P50226 295 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 DAP3P51398 398 aaKnown RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ARHGDIBP52566 201 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 CLDN2P57739 230 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SPOCK1Q08629 439 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 PON3Q15166 354 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 SMAD2Q15796 467 aaKnown RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 PRSS54Q6PEW0 395 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 RPTNQ6XPR3 784 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF574Q6ZN55 896 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF704Q6ZNC4 412 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 Q7L0L9 218 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 GGNQ86UU5 652 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 FAM160A2Q8N612 972 aaPredicted RBP3.03□□□□□ -1.92
SEC23A-207ENST00000554615 COX18Q8N8Q8 333 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 UBAC2Q8NBM4 344 aa3.03□□□□□ -1.92
SEC23A-207ENST00000554615 OR5T3Q8NGG3 340 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms