RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LNX2Q8N448 690 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 SLC37A3Q8NCC5 494 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 YIPF5Q969M3 257 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 FEVQ99581 238 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 NIPSNAP1Q9BPW8 284 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 CADM1Q9BY67 442 aaKnown RBP9.1□□□□□ -0.95
SHMT2-213ENST00000554600 POFUT1Q9H488 388 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF556Q9HAH1 456 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 SAP30LQ9HAJ7 183 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF275Q9NSD4 429 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-213ENST00000554600 TBCCD1Q9NVR7 557 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 PTTG3PQ9NZH4 202 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 BAIAP2Q9UQB8 552 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 STARD10Q9Y365 291 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ATRQ13535 2644 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 ZSCAN5BA6NJL1 495 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 F5H5K5 113 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 H3BSA7 217 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 LILRA1O75019 489 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 CRLF1O75462 422 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 TGFAP01135 160 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF3P17036 446 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 FMO3P31513 532 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 RGS6P49758 472 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 COX10Q12887 443 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 PSG7Q13046 419 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 RIN1Q13671 783 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 CRMP1Q14194 572 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 ZMAT1Q5H9K5 638 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 FAM166AQ6J272 317 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 SLC18B1Q6NT16 456 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 TMEM179BQ7Z7N9 219 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 IQCF1Q8N6M8 205 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 OR5L1Q8NGL2 311 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 OR6K6Q8NGW6 343 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 OR4Q3Q8NH05 313 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 CMBLQ96DG6 245 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
SHMT2-213ENST00000554600 ELMOD3Q96FG2 381 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 COG8Q96MW5 612 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 DCLRE1CQ96SD1 692 aaKnown RBP9.09□□□□□ -0.95
SHMT2-213ENST00000554600 COQ7Q99807 217 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 EGLN1Q9GZT9 426 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 MSL2Q9HCI7 577 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 CYSLTR2Q9NS75 346 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 KIF17Q9P2E2 1029 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 ATPIF1Q9UII2 106 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 KCNS2Q9ULS6 477 aa9.09□□□□□ -0.95
SHMT2-213ENST00000554600 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TCRBV3S1A0A5B6 114 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 LMX1BO60663 402 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 ICMTO60725 284 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TIPRLO75663 272 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 IGHV1-46P01743 117 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 LCATP04180 440 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 SPARCP09486 303 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TUBG1P23258 451 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TNFSF4P23510 183 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 IL2RGP31785 369 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 LIPAP38571 399 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 RPS27P42677 84 aaKnown RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 SLC6A9P48067 706 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 MMP15P51511 669 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TMEM33P57088 247 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HIST1H3AP68431 136 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TNFAIP6P98066 277 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 MVKQ03426 396 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 ECH1Q13011 328 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HLXQ14774 488 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TAF13Q15543 124 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HFEQ30201 348 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TMEM255AQ5JRV8 349 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 FAM209AQ5JX71 171 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 AVPI1Q5T686 147 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HIST2H3PS2Q5TEC6 136 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 CFAP77Q6ZQR2 320 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HIST2H3AQ71DI3 136 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 HS3ST5Q8IZT8 346 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 OR5AS1Q8N127 324 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 ATG16L2Q8NAA4 619 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 PTP4A1Q93096 173 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 APOBEC3DQ96AK3 386 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TIMD4Q96H15 378 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 ATF6BQ99941 703 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 BEX2Q9BXY8 128 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 MED20Q9H944 212 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TUBG2Q9NRH3 451 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 MRPL22Q9NWU5 206 aaKnown RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 NKIRAS2Q9NYR9 191 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 TREM2Q9NZC2 230 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 DNAJB9Q9UBS3 223 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 CGGBP1Q9UFW8 167 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 CYB5R1Q9UHQ9 305 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 KCNG2Q9UJ96 466 aa9.08□□□□□ -0.96
SHMT2-213ENST00000554600 PURGQ9UJV8 347 aaKnown RBP9.08□□□□□ -0.96
SHMT2-213ENST00000554600 ARRDC5A6NEK1 342 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms