RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C14orf28Q4W4Y0 310 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MRPL2Q5T653 305 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 FCRL6Q6DN72 434 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A25Q6KCM7 469 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PWWP2BQ6NUJ5 590 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 FAM199XQ6PEV8 388 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ENPP7Q6UWV6 458 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 APOOLQ6UXV4 268 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 Q6ZPA2 131 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF627Q7L945 461 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SLC16A9Q7RTY1 509 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PAQR7Q86WK9 346 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LINC01555Q8NAE3 123 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SLC16A11Q8NCK7 471 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR7G2Q8NG99 324 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR4E2Q8NGC2 313 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR5M9Q8NGP3 310 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LIPHQ8WWY8 451 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ST8SIA4Q92187 359 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PTX4Q96A99 478 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CLIP3Q96DZ5 547 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 C10orf90Q96M02 699 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 DERL3Q96Q80 235 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 DDOQ99489 341 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LMF2Q9BU23 707 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MLST8Q9BVC4 326 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF416Q9BWM5 594 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR51V1Q9H2C8 321 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 EQTNQ9NQ60 294 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF71Q9NQZ8 489 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PCDHB16Q9NRJ7 776 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 VSX1Q9NZR4 365 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LRIT1Q9P2V4 623 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MBD2Q9UBB5 411 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MTFP1Q9UDX5 166 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CHRNA9Q9UGM1 479 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OPN4Q9UHM6 478 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PLAGL1Q9UM63 463 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PPIEQ9UNP9 301 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 FOXJ3Q9UPW0 622 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PLEKHA6Q9Y2H5 1048 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MRPS7Q9Y2R9 242 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 KCNK7Q9Y2U2 307 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SLC22A7Q9Y694 548 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 DOCK9Q9BZ29 2069 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SCN2AQ99250 2005 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 RP1P56715 2156 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 USP9XQ93008 2570 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 KIF26BQ2KJY2 2108 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 MYO9AB2RTY4 2548 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 LRRK2Q5S007 2527 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 IGKV1-8A0A0C4DH67 115 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 TRBV5-5A0A0J9YX44 114 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 KANTRA0A1W2PQU2 76 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 RAB19A4D1S5 217 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 FAM183AA6NL82 134 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 MARCH11A6NNE9 402 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 G3V3Q6 166 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 H3BUI4 141 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 NDUFA2O43678 99 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 FCMRO60667 390 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 SRPX2O60687 465 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF254O75437 659 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 RDH16O75452 317 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 GLSO94925 669 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 NKX2-2O95096 273 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 SLC2A10O95528 541 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 PPP1R3DO95685 299 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 TNFP01375 233 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 CD8AP01732 235 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 THY1P04216 161 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 ALDOBP05062 364 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 GKN3PP0CG01 181 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 SMIM10L1P0DMW3 83 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 LIFP15018 202 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 TBPP20226 339 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 GCSHP23434 173 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 MPZP25189 248 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 CERS1P27544 350 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 PSMB5P28074 263 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 HTR2AP28223 471 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 MAP3K8P41279 467 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 PTH2RP49190 550 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 P2RX1P51575 399 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 FXYD6P3P58550 94 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 TAS2R19P59542 299 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 RPS11P62280 158 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 BTN3A2P78410 334 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 CRYZQ08257 329 aaKnown RBP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 SCRN3Q0VDG4 424 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 TRA2AQ13595 282 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 HLXQ14774 488 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-203ENST00000554264 MEF2DQ14814 521 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 GPR68Q15743 365 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 FAM189A2Q15884 450 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF141Q15928 474 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 DUSP5Q16690 384 aa5.29□□□□□ -1.56
VPS33B-203ENST00000554264 FHL5Q5TD97 284 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms