RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PGRMC1O00264 195 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 SLC9A3R1O14745 358 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 HSD17B6O14756 317 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 LIN7AO14910 233 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 POLR1CO15160 346 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 RGS16O15492 202 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 DNAJB6O75190 326 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 SMIM24O75264 130 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 ENTPD5O75356 428 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 NDUFS6O75380 124 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 CIB2O75838 187 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 CLPXO76031 633 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 LCA5LO95447 670 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 OXSR1O95747 527 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 SNAI1O95863 264 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 FGF1P05230 155 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 RPS17P08708 135 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 TLX1NBP0CAT3 122 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 MLNP12872 115 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PSMA5P28066 241 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 SPAM1P38567 509 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 MAGEA1P43355 309 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 QARSP47897 775 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 CDH6P55285 790 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 ART3Q13508 389 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PIGHQ14442 188 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 PDK4Q16654 411 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 KLHL40Q2TBA0 621 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 HNRNPA1L2Q32P51 320 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 HIKESHIQ53FT3 197 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 SFT2D3Q587I9 215 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 CDKL4Q5MAI5 379 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PRR9Q5T870 116 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 FBXW9Q5XUX1 488 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PRMT9Q6P2P2 845 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 FAM122BQ7Z309 247 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 DCXRQ7Z4W1 244 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 TMEM135Q86UB9 458 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PIANPQ8IYJ0 282 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 ZADH2Q8N4Q0 377 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 BPIFCQ8NFQ6 507 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PYROXD1Q8WU10 500 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 CCDC12Q8WUD4 166 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 MITD1Q8WV92 249 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 EMG1Q92979 244 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 TOP1MTQ969P6 601 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 CIDECQ96AQ7 238 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 CCDC127Q96BQ5 260 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 RASD2Q96D21 266 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 DUS3LQ96G46 650 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 CCDC42Q96M95 316 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 ZNF317Q96PQ6 595 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 ANGPTL4Q9BY76 406 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 BCL2L14Q9BZR8 327 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 DERL2Q9GZP9 239 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 OR52A5Q9H2C5 316 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 OR51V1Q9H2C8 321 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 NIPAL2Q9H841 368 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 LZTFL1Q9NQ48 299 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 SIRT7Q9NRC8 400 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 KLHL28Q9NXS3 571 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PSMC3IPQ9P2W1 217 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 PEF1Q9UBV8 284 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 ZNF229Q9UJW7 825 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PACSIN2Q9UNF0 486 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 GINS2Q9Y248 185 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 AP3M1Q9Y2T2 418 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 FADS3Q9Y5Q0 445 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 F11RQ9Y624 299 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 TMEM14AQ9Y6G1 99 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 IBTKQ9P2D0 1353 aaPredicted RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.68□□□□□ -2.14
VRK1-202ENST00000553683 RGS12O14924 1447 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 FHOD3Q2V2M9 1422 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 A0A0J9YYE9 177 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SMCO2A6NFE2 343 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR6C70A6NIJ9 312 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR2AG2A6NM03 316 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR52A4PA6NMU1 304 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 MIF4GDA9UHW6 222 aaKnown RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 INS-IGF2F8WCM5 200 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 H0YJX3 145 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 WRBO00258 174 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TOX3O15405 576 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 CALUO43852 315 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 MGRN1O60291 552 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 RAMP3O60896 148 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 PSIP1O75475 530 aaKnown RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 SERPINB7O75635 380 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ATP5LO75964 103 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CCNB2O95067 398 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 VAMP5O95183 116 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 BRI3O95415 125 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 AHSA1O95433 338 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SERPINA3P01011 423 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 IL1BP01584 269 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TRBC1P01850 177 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SERPINA6P08185 405 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CD3GP09693 182 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms