RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 DCXRQ7Z4W1 244 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 LURAP1LQ8IV03 231 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 PQLC1Q8N2U9 271 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 OR6N2Q8NGY6 317 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 INTS14Q96SY0 518 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 POFUT1Q9H488 388 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 PNRC2Q9NPJ4 139 aaKnown RBP19.57■□□□□ 0.72
TDP1-206ENST00000553569 TAAR3PQ9P1P4 343 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 FBXO9Q9UK97 447 aaPredicted RBP19.57■□□□□ 0.72
TDP1-206ENST00000553569 F8P00451 2351 aa19.57■□□□□ 0.72
TDP1-206ENST00000553569 ICMTO60725 284 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 BAG2O95816 211 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 CD99P14209 185 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 GCH1P30793 250 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 POLR2IP36954 125 aaKnown RBP19.56■□□□□ 0.72
TDP1-206ENST00000553569 EFNA4P52798 201 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 ZNF718Q3SXZ3 478 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 C12orf73Q69YU5 71 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 OR10S1Q8NGN2 331 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 IPCEF1Q8WWN9 437 aaPredicted RBP19.56■□□□□ 0.72
TDP1-206ENST00000553569 MARS2Q96GW9 593 aaKnown RBP19.56■□□□□ 0.72
TDP1-206ENST00000553569 GABARAPL3Q9BY60 117 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 RAB1BQ9H0U4 201 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 TBCCD1Q9NVR7 557 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 ORC6Q9Y5N6 252 aa19.56■□□□□ 0.72
TDP1-206ENST00000553569 IGLV3-9A0A075B6K5 115 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 F5H5K5 113 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 PRODHO43272 600 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 ERCC1P07992 297 aaPredicted RBP19.55■□□□□ 0.72
TDP1-206ENST00000553569 APOFQ13790 326 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 CBR4Q8N4T8 237 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 ZNF525Q8N782 197 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 KLF14Q8TD94 323 aaPredicted RBP19.55■□□□□ 0.72
TDP1-206ENST00000553569 DCLRE1CQ96SD1 692 aaKnown RBP19.55■□□□□ 0.72
TDP1-206ENST00000553569 TMUB1Q9BVT8 246 aa19.55■□□□□ 0.72
TDP1-206ENST00000553569 CELSR1Q9NYQ6 3014 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 MED13LQ71F56 2210 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 H7C1Q1 480 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SELENOFO60613 162 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 F12P00748 615 aaPredicted RBP19.54■□□□□ 0.72
TDP1-206ENST00000553569 ALPLP05186 524 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 NAT2P11245 290 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SLC2A5P22732 501 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 ECH1Q13011 328 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 EIF2B1Q14232 305 aaKnown RBP19.54■□□□□ 0.72
TDP1-206ENST00000553569 PCK2Q16822 640 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 TEX30Q5JUR7 227 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SLC35D3Q5M8T2 416 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 CLEC2AQ6UVW9 174 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SPATC1Q76KD6 591 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 DPY19L4Q7Z388 723 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 C1orf174Q8IYL3 243 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 TCEANCQ8N8B7 351 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SNX33Q8WV41 574 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 COPS4Q9BT78 406 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 CENPMQ9NSP4 180 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 SLCO1C1Q9NYB5 712 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 USE1Q9NZ43 259 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 STARD10Q9Y365 291 aa19.54■□□□□ 0.72
TDP1-206ENST00000553569 ERICH4A6NGS2 130 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 TLX2O43763 284 aaPredicted RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 NAA10P41227 235 aaPredicted RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 RGS6P49758 472 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 ALDH3A2P51648 485 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 TNK1Q13470 666 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 RSPO1Q2MKA7 263 aaPredicted RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 TMEM255AQ5JRV8 349 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 MBNL2Q5VZF2 373 aaKnown RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 BCDIN3DQ7Z5W3 292 aaKnown RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 TIGD4Q8IY51 512 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 GTF3AQ92664 365 aaKnown RBP19.53■□□□□ 0.72
TDP1-206ENST00000553569 SLAMF6Q96DU3 332 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 IL4I1Q96RQ9 567 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 C9orf16Q9BUW7 83 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 MARCH7Q9H992 704 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 PTTG3PQ9NZH4 202 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 GPR160Q9UJ42 338 aa19.53■□□□□ 0.72
TDP1-206ENST00000553569 H3BSA7 217 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 IGHV3-13P01766 116 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 ACSM4P0C7M7 580 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 TAF13Q15543 124 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 CARTPTQ16568 116 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 KRTAP27-1Q3LI81 207 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 ZIK1Q3SY52 487 aaPredicted RBP19.52■□□□□ 0.72
TDP1-206ENST00000553569 CIARTQ8N365 385 aaPredicted RBP19.52■□□□□ 0.72
TDP1-206ENST00000553569 TMEM163Q8TC26 289 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 ST7LQ8TDW4 575 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 SPTSSAQ969W0 71 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 APOBEC3DQ96AK3 386 aaPredicted RBP19.52■□□□□ 0.72
TDP1-206ENST00000553569 MS4A5Q9H3V2 200 aa19.52■□□□□ 0.72
TDP1-206ENST00000553569 DDX28Q9NUL7 540 aaKnown RBP19.52■□□□□ 0.72
TDP1-206ENST00000553569 CHD3Q12873 2000 aaKnown RBP19.51■□□□□ 0.71
TDP1-206ENST00000553569 CCDC182A6NF36 153 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 M0R135 149 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 SMAD7O15105 426 aaKnown RBP19.51■□□□□ 0.71
TDP1-206ENST00000553569 SLC6A9P48067 706 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 RAD23AP54725 363 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 TPTEP56180 551 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 LCN1P1Q5VSP4 162 aa19.51■□□□□ 0.71
TDP1-206ENST00000553569 DNM1P46Q6ZS02 220 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms