RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 OR10AD1Q8NGE0 317 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 MAP6Q96JE9 813 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 ZNF665Q9H7R5 613 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 KRCC1Q9NPI7 259 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-206ENST00000553529 PLSCR5A0PG75 271 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 DYNC1I1O14576 645 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ARPC3O15145 178 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ZNF205O95201 554 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 NOS3P29474 1203 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 GGT2P36268 569 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ARHGDIAP52565 204 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 TMEM33P57088 247 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 SMIM11AP58511 58 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 SEC61A1P61619 476 aaKnown RBP15.41■□□□□ 0.06
SHMT2-206ENST00000553529 MRPS11P82912 194 aaKnown RBP15.41■□□□□ 0.06
SHMT2-206ENST00000553529 TNFAIP6P98066 277 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-206ENST00000553529 DHFR2Q86XF0 187 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 IQCF1Q8N6M8 205 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 BHLHE23Q8NDY6 225 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 NIPSNAP1Q9BPW8 284 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ELOVL3Q9HB03 270 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 TBCCD1Q9NVR7 557 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 TAS2R1Q9NYW7 299 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 LPAR3Q9UBY5 353 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 GPR160Q9UJ42 338 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 CDH10Q9Y6N8 788 aa15.41■□□□□ 0.06
SHMT2-206ENST00000553529 ISPDA4D126 451 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 PLPP2O43688 288 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 CCNB2O95067 398 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 RENP00797 406 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 IFNA2P01563 188 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 MSMBP08118 114 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 HMGA2P52926 109 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 DVL1P1P54792 670 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-206ENST00000553529 COX10Q12887 443 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 HFEQ30201 348 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 ZBTB46Q86UZ6 589 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 SLC37A3Q8NCC5 494 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 ZNF420Q8TAQ5 688 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-206ENST00000553529 TMEM186Q96B77 213 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 ELMOD3Q96FG2 381 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 HCAR1Q9BXC0 346 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 MED20Q9H944 212 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 UBAP1Q9NZ09 502 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 DYSFO75923 2080 aa15.4■□□□□ 0.06
SHMT2-206ENST00000553529 LOC105371242A0A075B767 164 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 B4DSR2 109 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 CLDN25C9JDP6 229 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 F5H5K5 113 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 ACOT8O14734 319 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 IGHV2-5P01817 119 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 HLA-DQA2P01906 255 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 ADRA2CP18825 462 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 KITLGP21583 273 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 CALB2P22676 271 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 CRABP1P29762 137 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 CDK5R2Q13319 367 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 CRMP1Q14194 572 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 TRIM25Q14258 630 aaKnown RBP15.39■□□□□ 0.05
SHMT2-206ENST00000553529 KRTAP27-1Q3LI81 207 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 GLCCI1Q86VQ1 547 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 ADGRG5Q8IZF4 528 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 THTPAQ9BU02 230 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 TBC1D23Q9NUY8 699 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 NDE1Q9NXR1 346 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 FAM53CQ9NYF3 392 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 SAMHD1Q9Y3Z3 626 aaKnown RBP15.39■□□□□ 0.05
SHMT2-206ENST00000553529 ATRQ13535 2644 aa15.39■□□□□ 0.05
SHMT2-206ENST00000553529 MLNRO43193 412 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 HLA-DPB1P04440 258 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 ACSM4P0C7M7 580 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 GSTM3P21266 225 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 ZFP36P26651 326 aaKnown RBP15.38■□□□□ 0.05
SHMT2-206ENST00000553529 FAM209AQ5JX71 171 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 FAM201AQ5SY85 155 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 FAHD2BQ6P2I3 314 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-206ENST00000553529 SPATC1Q76KD6 591 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 ZNF511Q8NB15 262 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 DVL3Q92997 716 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-206ENST00000553529 HAVCR1Q96D42 359 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 FAHD2AQ96GK7 314 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 OR2V2Q96R30 315 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 SIGLEC11Q96RL6 698 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 PITX2Q99697 317 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 TSSK6Q9BXA6 273 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 METTL17Q9H7H0 456 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-206ENST00000553529 G6PC2Q9NQR9 355 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 CYB5R1Q9UHQ9 305 aa15.38■□□□□ 0.05
SHMT2-206ENST00000553529 MT-ND5P03915 603 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 CD55P08174 381 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 ADH4P08319 380 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 SRP14P37108 136 aaKnown RBP15.37■□□□□ 0.05
SHMT2-206ENST00000553529 LCN2P80188 198 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 SNAI3Q3KNW1 292 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 OR2T5Q6IEZ7 315 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 DNM1P34Q6PK57 102 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 RASSF6Q6ZTQ3 369 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms