RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SNCBQ16143 134 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 COLCA1Q6ZS62 124 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 SSX6Q7RTT6 188 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 SLC35F2Q8IXU6 374 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 ALDH16A1Q8IZ83 802 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 NUP37Q8NFH4 326 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 OR2AJ1Q8NGZ0 328 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 RADILQ96JH8 1075 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 Q96MT0 163 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 ATF6BQ99941 703 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 CDADC1Q9BWV3 514 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 CLEC4MQ9H2X3 399 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 CLN6Q9NWW5 311 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 RAB26Q9ULW5 256 aa12.81□□□□□ -0.36
MTHFD1-204ENST00000553405 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 C5orf49A4QMS7 147 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 TMCC2O75069 709 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 PTHP01270 115 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 IGHA1P01876 353 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 CRYAAP02489 173 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 ACSM4P0C7M7 580 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF85Q03923 595 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 POU4F2Q12837 409 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 ECH1Q13011 328 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 TBC1D28Q2M2D7 210 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 TMEM154Q6P9G4 183 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 RFPL4BQ6ZWI9 263 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 TMEM171Q8WVE6 324 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 RNF166Q96A37 237 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 MNTQ99583 582 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 PLCXD1Q9NUJ7 323 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 FKBP14Q9NWM8 211 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 MYRFQ9Y2G1 1151 aa12.8□□□□□ -0.36
MTHFD1-204ENST00000553405 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 C5orf63A6NC05 138 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF878C9JN71 531 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 GPRIN2O60269 458 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 SMPD2O60906 423 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 ABHD16AO95870 558 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 NGFP01138 241 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 LYNP07948 512 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 APLNRP35414 380 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 GDI2P50395 445 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 TMEM255AQ5JRV8 349 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 SLC22A25Q6T423 547 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 NAA40Q86UY6 237 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 OR1J2Q8NGS2 313 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 JAM3Q9BX67 310 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 FGF20Q9NP95 211 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 SLCO1C1Q9NYB5 712 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 UBAP1Q9NZ09 502 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 CACNA1DQ01668 2161 aa12.79□□□□□ -0.36
MTHFD1-204ENST00000553405 A0A1W2PQL4 384 aaPredicted RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 HS3ST1O14792 307 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 DENRO43583 198 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 XPNPEP2O43895 674 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 SRSF10O75494 262 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 OR2T7P0C7T2 308 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 DANCRP0C864 163 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 THBS4P35443 961 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 GLRXP35754 106 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 UCP2P55851 309 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 RAB40BQ12829 278 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 SNTB2Q13425 540 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 OR52I1Q8NGK6 324 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 OR2T27Q8NH04 317 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 C4orf45Q96LM5 186 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 KCNJ15Q99712 375 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 C1QTNF5Q9BXJ0 243 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 POFUT1Q9H488 388 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 ZNF442Q9H7R0 627 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 CA10Q9NS85 328 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 TMEM14AQ9Y6G1 99 aa12.78□□□□□ -0.36
MTHFD1-204ENST00000553405 ANKRD17O75179 2603 aaKnown RBP12.77□□□□□ -0.36
MTHFD1-204ENST00000553405 SNTNA6NMZ2 147 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 MAGEB4O15481 346 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 CD8AP01732 235 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 CXCR4P61073 352 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 ERVS71-1P61550 626 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 MVKQ03426 396 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 ADIPOQQ15848 244 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 MST1LQ2TV78 715 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 DEGS2Q6QHC5 323 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF322Q6U7Q0 402 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 LRRN1Q6UXK5 716 aa12.77□□□□□ -0.37
MTHFD1-204ENST00000553405 ZNF611Q8N823 705 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms