RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 POU2F1P14859 743 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 TNNI3P19429 210 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CDK9P50750 372 aaKnown RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 ARHGDIBP52566 201 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 SNU13P55769 128 aaKnown RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 FBXW4P57775 412 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 RPS4XP62701 263 aaKnown RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CCZ1BP86790 482 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CCZ1P86791 482 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 TFDP2Q14188 446 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 PIGGQ5H8A4 983 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CYHR1Q6ZMK1 362 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 H2AFVQ71UI9 128 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CPNE9Q8IYJ1 553 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 PRELID2Q8N945 189 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 MFSD9Q8NBP5 474 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 FAM83FQ8NEG4 500 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 OR6M1Q8NGM8 313 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 OR5M1Q8NGP8 315 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CTNNBL1Q8WYA6 563 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 UCN3Q969E3 161 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 OR4K3Q96R72 315 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 VAT1Q99536 393 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CHP1Q99653 195 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 DOHHQ9BU89 302 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 TSSK1BQ9BXA7 367 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF226Q9NYT6 803 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 UVRAGQ9P2Y5 699 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 EMCNQ9ULC0 261 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 SLC22A7Q9Y694 548 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 CHCHD2Q9Y6H1 151 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 A0A0A6YYD4 124 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 A4D1N5 150 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 HACD1B0YJ81 288 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 B4DXG7 233 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RAMP1O60894 148 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 VAPBO95292 243 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CD8AP01732 235 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CATP04040 527 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CCDC166P0CW27 439 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SMIM10L1P0DMW3 83 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RPL22P35268 128 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CD79BP40259 229 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 P2RY4P51582 365 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CCR8P51685 355 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 PLA2G16P53816 162 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CD47Q08722 323 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 DOC2AQ14183 400 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RCAN2Q14206 197 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 NNATQ16517 81 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 C18orf21Q32NC0 220 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 FBXO48Q5FWF7 155 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SEL1L2Q5TEA6 688 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 OR5M10Q6IEU7 315 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 AGTRAPQ6RW13 159 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 OPN5Q6U736 354 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 ENPP6Q6UWR7 440 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 BZW1Q7L1Q6 419 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 PRSS48Q7RTY5 328 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 GRAMD2AQ8IUY3 354 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CDKL3Q8IVW4 592 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CEND1Q8N111 149 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RNF175Q8N4F7 328 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 C3orf56Q8N813 242 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SNX31Q8N9S9 440 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 PAQR8Q8TEZ7 354 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF721Q8TF20 911 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 NEIL2Q969S2 332 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SLCO4A1Q96BD0 722 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SMIM10Q96HG1 83 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RILPQ96NA2 401 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 LRRC40Q9H9A6 602 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CALHM2Q9HA72 323 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 GRPEL1Q9HAV7 217 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 FBXO6Q9NRD1 293 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 UTP6Q9NYH9 597 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 KLRF1Q9NZS2 232 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CLCF1Q9UBD9 225 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 BOKQ9UMX3 212 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 DIMT1Q9UNQ2 313 aaKnown RBP3.16□□□□□ -1.9
ATXN3-217ENST00000553287 PDE10AQ9Y233 779 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 C15orf41Q9Y2V0 281 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 CLCA3PQ9Y6N3 262 aa3.16□□□□□ -1.9
ATXN3-217ENST00000553287 ALPK2Q86TB3 2170 aa3.15□□□□□ -1.9
ATXN3-217ENST00000553287 EXPH5Q8NEV8 1989 aa3.15□□□□□ -1.91
ATXN3-217ENST00000553287 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
ATXN3-217ENST00000553287 E5RI56 91 aa3.15□□□□□ -1.91
ATXN3-217ENST00000553287 APOC4-APOC2K7ER74 178 aa3.15□□□□□ -1.91
ATXN3-217ENST00000553287 ERI3O43414 337 aaKnown RBP3.15□□□□□ -1.91
ATXN3-217ENST00000553287 TCF21O43680 179 aa3.15□□□□□ -1.91
ATXN3-217ENST00000553287 TYROBPO43914 113 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms