RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 HIST2H3AQ71DI3 136 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 ZNF511Q8NB15 262 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 COX4I2Q96KJ9 171 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 ATF6BQ99941 703 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 OR2J1Q9GZK6 312 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 DLL4Q9NR61 685 aa15.85■□□□□ 0.13
PRPF40B-216ENST00000552301 MITFO75030 526 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 NGFP01138 241 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 DBHP09172 617 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 TUBG1P23258 451 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 GSTT1P30711 240 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 RPS7P62081 194 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 KLHL12Q53G59 568 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 ZCCHC24Q8N2G6 241 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 OR5L1Q8NGL2 311 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 KLF14Q8TD94 323 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 ZNRF4Q8WWF5 429 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 MARS2Q96GW9 593 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 INTS14Q96SY0 518 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 OSBPL10Q9BXB5 764 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 WDR76Q9H967 626 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 HINT3Q9NQE9 182 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 TUBG2Q9NRH3 451 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 TVP23BQ9NYZ1 205 aa15.84■□□□□ 0.13
PRPF40B-216ENST00000552301 PLSCR5A0PG75 271 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 RNF223E7ERA6 249 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 F5H5K5 113 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 J3QW42 95 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF593O00488 134 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 GLCEO94923 617 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 IGHV3-13P01766 116 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 NAT2P11245 290 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 RPS27P42677 84 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 PTGES3Q15185 160 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 TAF13Q15543 124 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 MBNL2Q5VZF2 373 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 KDM4DQ6B0I6 523 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 CXXC5Q7LFL8 322 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 DCXRQ7Z4W1 244 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 BIVMQ86UB2 503 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 ERI1Q8IV48 349 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 CPOQ8IVL8 374 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 OR6N2Q8NGY6 317 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 SPTSSAQ969W0 71 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 APOBEC3DQ96AK3 386 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 PKP2Q99959 881 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 RBM4BQ9BQ04 359 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 HCAR1Q9BXC0 346 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 REG4Q9BYZ8 158 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 ORC6Q9Y5N6 252 aa15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 MAP1AP78559 2803 aaPredicted RBP15.83■□□□□ 0.12
PRPF40B-216ENST00000552301 IGHV4-30-2A0A087WSY4 118 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 H3BNX3 289 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 PRODHO43272 600 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 TIMM8AO60220 97 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 DAOP14920 347 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 SLC25A16P16260 332 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 MPV17P39210 176 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 TPTEP56180 551 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 ZMAT1Q5H9K5 638 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 LINC01590Q5TEZ4 76 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 DNM1P46Q6ZS02 220 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 STMN2Q93045 179 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 MAP6Q96JE9 813 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 CIB1Q99828 191 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 PIMREGQ9BSJ6 248 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 COPS4Q9BT78 406 aa15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 CGGBP1Q9UFW8 167 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-216ENST00000552301 NDUFS8O00217 210 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 SLC6A9P48067 706 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 PCGF3Q3KNV8 242 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 TEX30Q5JUR7 227 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 SLC35D3Q5M8T2 416 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 LCN1P1Q5VSP4 162 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 SHFQ7M4L6 423 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 C10orf105Q8TEF2 133 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 UBASH3BQ8TF42 649 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 PTP4A1Q93096 173 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 ZMYND19Q96E35 227 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 RIBC2Q9H4K1 309 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 PNRC2Q9NPJ4 139 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 CYSLTR2Q9NS75 346 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 CENPMQ9NSP4 180 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 STARD10Q9Y365 291 aa15.81■□□□□ 0.12
PRPF40B-216ENST00000552301 LOC390937A0A1W2PQ73 354 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 C17orf100A8MU93 164 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF878C9JN71 531 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 M0R135 149 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 TPD52L2O43399 206 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 LIPAP38571 399 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF81P51508 661 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 PPP2R2BQ00005 443 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 EIF2B1Q14232 305 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 PCK2Q16822 640 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 SLX4IPQ5VYV7 408 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 SLAMF6Q96DU3 332 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 ZNF799Q96GE5 643 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 S100A14Q9HCY8 104 aa15.8■□□□□ 0.12
PRPF40B-216ENST00000552301 DDX28Q9NUL7 540 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms