RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 UTS2BQ765I0 119 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 BIVMQ86UB2 503 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 OR6M1Q8NGM8 313 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 CAPSLQ8WWF8 208 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 PSMF1Q92530 271 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 FGGYQ96C11 551 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 OR2M2Q96R28 347 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
RAB3IP-216ENST00000552199 CIB4A0PJX0 185 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 NPIPA2E9PIF3 369 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 NPIPA3F8WFD2 350 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 GMDSO60547 372 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 HSD11B1P28845 292 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 ZNF133P52736 654 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 PSMA6P60900 246 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 IFITM2Q01629 132 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 SPOCK1Q08629 439 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TAF13Q15543 124 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 C1orf100Q5SVJ3 147 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 C10orf128Q5T292 105 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 NCCRP1Q6ZVX7 275 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 YRDCQ86U90 279 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 BEST3Q8N1M1 668 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 OR6N1Q8NGY5 312 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 KCNE4Q8WWG9 221 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 NKX3-1Q99801 234 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TP63Q9H3D4 680 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 ING3Q9NXR8 418 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 CGGBP1Q9UFW8 167 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 MRPS18BQ9Y676 258 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 WDFY4Q6ZS81 3184 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TTC28Q96AY4 2481 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 NCKAP5O14513 1909 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 LOC390937A0A1W2PQ73 354 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 LRRC3CA6NJW4 275 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 RER1O15258 196 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 SYT7O43581 403 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 DNPH1O43598 174 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 SGCAQ16586 387 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 ELFN2Q5R3F8 820 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 PHYHD1Q5SRE7 291 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TMEM164Q5U3C3 297 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 SFRP4Q6FHJ7 346 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 LUZP2Q86TE4 346 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TMEM123Q8N131 208 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 OR14L1PQ8NHC6 308 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 GPR87Q9BY21 358 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 ACTR6Q9GZN1 396 aa12.41□□□□□ -0.42
RAB3IP-216ENST00000552199 TRAV18A0A075B6X5 111 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 KDM4BO94953 1096 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 WDPCPO95876 746 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 YES1P07947 543 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 RFPL3SP0C7P2 107 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 ENPP1P22413 925 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 DLSTP36957 453 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 CYB561P49447 251 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 PRKXP51817 358 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 RAC3P60763 192 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 MRPS15P82914 257 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 GSG1Q2KHT4 349 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 FOXL2NBQ6ZUU3 175 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 JAGN1Q8N5M9 183 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 ZIC4Q8N9L1 334 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 PHF21AQ96BD5 680 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 CDC6Q99741 560 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 ATG5Q9H1Y0 275 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 MED28Q9H204 178 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 DEPPQ9NTK1 212 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 DOCK10Q96BY6 2186 aa12.4□□□□□ -0.42
RAB3IP-216ENST00000552199 A0A1B0GVI7 797 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 C21orf140B9A014 251 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 H7C417 338 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 TERTO14746 1132 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 RBBP9O75884 186 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF806P0C7X5 589 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 MSR1P21757 451 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 SUCLG1P53597 346 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 MAB21L1Q13394 359 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF813Q6ZN06 617 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 LIX1LQ8IVB5 337 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms