RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 C2orf74A8MZ97 194 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 EEF1E1-BLOC1S5C9J1V9 151 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 C9JVG2 144 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 BMPR1BO00238 502 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RGS16O15492 202 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 EEF1E1O43324 174 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CLDN9O95484 217 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 IGF1P05019 195 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 FGF4P08620 206 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CCDC159P0C7I6 412 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RALBP11234 206 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ICAM2P13598 275 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 PTNP21246 168 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 GCAP28676 217 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 PEBP1P30086 187 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ARHGDIAP52565 204 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 EFNB2P52799 333 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TMEM50BP56557 158 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RGS8P57771 180 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 FKBP3Q00688 224 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RIPPLY1Q0D2K3 151 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CRMP1Q14194 572 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 FASTKD3Q14CZ7 662 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 HADHQ16836 314 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 KLHL38Q2WGJ6 581 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TRIM16LQ309B1 348 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RAET1LQ5VY80 246 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CYB5R2Q6BCY4 276 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TTC19Q6DKK2 380 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 FRMPD2BQ6IN97 320 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 FAM53AQ6NSI3 398 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TMEM205Q6UW68 189 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TMEM107Q6UX40 140 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ADAMTSL5Q6ZMM2 481 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 EML6Q6ZMW3 1958 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 DNM1P46Q6ZS02 220 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF771Q7L3S4 317 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TPRA1Q86W33 373 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 EGFL6Q8IUX8 553 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 DCUN1D3Q8IWE4 304 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 BPIFB2Q8N4F0 458 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 NPWQ8N729 165 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 MFSD9Q8NBP5 474 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 OR51G2Q8NGK0 314 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 RAB3IL1Q8TBN0 382 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 PAGE5Q96GU1 130 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TIMD4Q96H15 378 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ART5Q96L15 291 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF396Q96N95 335 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CYTH2Q99418 400 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CHP1Q99653 195 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 C11orf70Q9BRQ4 267 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 CRLF2Q9HC73 371 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 NT5MQ9NPB1 228 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 GLRX2Q9NS18 164 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 IL36GQ9NZH8 169 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF282Q9UDV7 671 aaPredicted RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 MTRF1LQ9UGC7 380 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 NXT1Q9UKK6 140 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TMCO1Q9UM00 188 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 PRPF19Q9UMS4 504 aaKnown RBP3.06□□□□□ -1.92
LIMA1-208ENST00000551691 ABCG2Q9UNQ0 655 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 TIMM10BQ9Y5J6 103 aa3.06□□□□□ -1.92
LIMA1-208ENST00000551691 PRR14LQ5THK1 2151 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ARHGAP21Q5T5U3 1957 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 RAI1Q7Z5J4 1906 aaPredicted RBP3.05□□□□□ -1.92
LIMA1-208ENST00000551691 PPIAL4EA0A075B759 164 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 SERTM2A0A1B0GWG4 89 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 A0A1W2PQ72 361 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 KLRC4-KLRK1H3BQV0 150 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.05□□□□□ -1.92
LIMA1-208ENST00000551691 FCN1O00602 326 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ABCD4O14678 606 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 TM9SF1O15321 606 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 TYROBPO43914 113 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 STX10O60499 249 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 CDH16O75309 829 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 UGT2B17O75795 530 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ATP5LO75964 103 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 NXPH4O95158 308 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 CA1P00915 261 aaPredicted RBP3.05□□□□□ -1.92
LIMA1-208ENST00000551691 SOD3P08294 240 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 STAG3L3P0CL85 134 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 PPIAL4FP0DN26 164 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 GNB3P16520 340 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 BCL3P20749 454 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 SERPINA2P20848 420 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 MAGP20916 626 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 MAGEA1P43355 309 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 CYB561P49447 251 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 PLGLB1Q02325 96 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF85Q03923 595 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 PUDPQ08623 228 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ARHGAP19Q14CB8 494 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 PCK2Q16822 640 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 TMEM44Q2T9K0 475 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 MOGAT2Q3SYC2 334 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 ZFP69Q49AA0 526 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 BCL7AQ4VC05 210 aa3.05□□□□□ -1.92
LIMA1-208ENST00000551691 TP53I3Q53FA7 332 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms