RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LINC01590Q5TEZ4 76 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 CORO6Q6QEF8 472 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNRF4Q8WWF5 429 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 SLC7A6Q92536 515 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 TVP23AA6NH52 213 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 G3V2T6 193 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 SURF4O15260 269 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 NAT2P11245 290 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 LIPAP38571 399 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 MPV17P39210 176 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ENTPD1P49961 510 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 CDK5Q00535 292 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 PCK2Q16822 640 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 TEX30Q5JUR7 227 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ACSM5Q6NUN0 579 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ZDHHC13Q8IUH4 622 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 OR51L1Q8NGJ5 315 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 PITX2Q99697 317 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ATF6BQ99941 703 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 PNRC2Q9NPJ4 139 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 CYSLTR2Q9NS75 346 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 NKIRAS2Q9NYR9 191 aa13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 ANK3Q12955 4377 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-211ENST00000551063 PLSCR5A0PG75 271 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 GYPBP06028 91 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 DBHP09172 617 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 CLUP10909 449 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF23P17027 643 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 GIFP27352 417 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 NR4A2P43354 598 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 DAPP51397 102 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 CRISP1P54107 249 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 ESRRGP62508 458 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 CARTPTQ16568 116 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 LRTOMTQ8WZ04 291 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 APOBEC3DQ96AK3 386 aaPredicted RBP13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 DDX28Q9NUL7 540 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
PRPF40B-211ENST00000551063 FAM183AA6NL82 134 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 PRODHO43272 600 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 GLCEO94923 617 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 HPXP02790 462 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 ADH4P08319 380 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 SPARCP09486 303 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 KITLGP21583 273 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 MMP15P51511 669 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 PPP2R2BQ00005 443 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 FAM209AQ5JX71 171 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 KDM4DQ6B0I6 523 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF511Q8NB15 262 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 RDH5Q92781 318 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 CENPNQ96H22 339 aaPredicted RBP13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 BPESC1Q9GZL8 116 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 WDR76Q9H967 626 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 TLN2Q9Y4G6 2542 aa13.16□□□□□ -0.3
PRPF40B-211ENST00000551063 NCR1O76036 304 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 ACSM4P0C7M7 580 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 RAC2P15153 192 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 ACHEP22303 614 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 GSTT1P30711 240 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 RPS27P42677 84 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF81P51508 661 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 TPTEP56180 551 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 PSG7Q13046 419 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 SLC35D3Q5M8T2 416 aa13.15□□□□□ -0.3
PRPF40B-211ENST00000551063 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms