RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 UNKLQ9H9P5 680 aaKnown RBP19.38■□□□□ 0.69
SMARCD1-209ENST00000550477 FAM32AQ9Y421 112 aaKnown RBP19.38■□□□□ 0.69
SMARCD1-209ENST00000550477 SNX13Q9Y5W8 968 aa19.38■□□□□ 0.69
SMARCD1-209ENST00000550477 SLC22A2O15244 555 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 IRF2P14316 349 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 CTLA4P16410 223 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 SELEP16581 610 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 MMP16P51512 607 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 MESTQ5EB52 335 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 TBPL2Q6SJ96 375 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 FBXW12Q6X9E4 464 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 ADCK1Q86TW2 530 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 NEIL1Q96FI4 390 aaPredicted RBP19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 SYT4Q9H2B2 425 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 PTTG3PQ9NZH4 202 aa19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 COA3Q9Y2R0 106 aaPredicted RBP19.37■□□□□ 0.69
SMARCD1-209ENST00000550477 CXCR6O00574 342 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 NDUFAB1O14561 156 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 CDC42EP2O14613 210 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 FFAR1O14842 300 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 CRABP1P29762 137 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 CD80P33681 288 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 CENPAP49450 140 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 RPS6KA3P51812 740 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 ZNF181Q2M3W8 571 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 OR2T2Q6IF00 324 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 CBLL1Q75N03 491 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 FAM122BQ7Z309 247 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 KLBQ86Z14 1044 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 OR8B3Q8NGG8 313 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 RP9Q8TA86 221 aaKnown RBP19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 RAB40AQ8WXH6 277 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 SLC7A6Q92536 515 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 MEGF10Q96KG7 1140 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 OR8B2Q96RD0 313 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 HCAR1Q9BXC0 346 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 TMEM165Q9HC07 324 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 TMEM100Q9NV29 134 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 AURKCQ9UQB9 309 aa19.36■□□□□ 0.69
SMARCD1-209ENST00000550477 LIPEQ05469 1076 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 CCDC92Q53HC0 331 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 LEG1Q6P5S2 330 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 C9orf139Q6ZV77 190 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 ZNF420Q8TAQ5 688 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 HOPXQ9BPY8 73 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 C1QTNF5Q9BXJ0 243 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 HDHD2Q9H0R4 259 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 SLITRK2Q9H156 845 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 NRIP3Q9NQ35 241 aa19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 VSX1Q9NZR4 365 aaPredicted RBP19.35■□□□□ 0.69
SMARCD1-209ENST00000550477 RER1O15258 196 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 FSTL3O95633 263 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 HLXQ14774 488 aaPredicted RBP19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 SLC9A3R2Q15599 337 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 C16orf87Q6PH81 154 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 DPY19L2P2Q6ZN68 376 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 OR10AD1Q8NGE0 317 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 ZDHHC16Q969W1 377 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 UPRTQ96BW1 309 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 RCN3Q96D15 328 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 FAM46AQ96IP4 442 aaKnown RBP19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 HSH2DQ96JZ2 352 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 COQ7Q99807 217 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 FGFR1OP2Q9NVK5 253 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 CMTM6Q9NX76 183 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 KIF17Q9P2E2 1029 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 RPS6KA6Q9UK32 745 aa19.34■□□□□ 0.69
SMARCD1-209ENST00000550477 IGHV2-70DA0A0C4DH43 119 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 SOCS2O14508 198 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 CYB5R3P00387 301 aaPredicted RBP19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 SERPINA1P01009 418 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 CRYBA1P05813 215 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 H1F0P07305 194 aaKnown RBP19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 BPIFB3P59826 476 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 KCNMB1Q16558 191 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 TREML4Q6UXN2 200 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC15A3Q8IY34 581 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 OR11L1Q8NGX0 322 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 ERGIC1Q969X5 290 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 FAM162AQ96A26 154 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 ZNF48Q96MX3 618 aaPredicted RBP19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 GPX7Q96SL4 187 aaPredicted RBP19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 NUAK2Q9H093 628 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 CLN8Q9UBY8 286 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 SIGLEC7Q9Y286 467 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 IER3IP1Q9Y5U9 82 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 ENPP4Q9Y6X5 453 aa19.33■□□□□ 0.68
SMARCD1-209ENST00000550477 A0A1B0GUS0 222 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 IQCF6A8MYZ5 107 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 PTP4A3O75365 173 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 GPANK1O95872 356 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 DBHP09172 617 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 FUT4P22083 530 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 ERFP50548 548 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 SF3A3Q12874 501 aaKnown RBP eCLIP19.32■□□□□ 0.686e-7■■■■□ 20.6
SMARCD1-209ENST00000550477 HNRNPA0Q13151 305 aaKnown RBP19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 KRT72Q14CN4 511 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 FGD3Q5JSP0 725 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 MOGAT3Q86VF5 341 aa19.32■□□□□ 0.68
SMARCD1-209ENST00000550477 SLC7A13Q8TCU3 470 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms