RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 GJC3Q8NFK1 279 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 FGGYQ96C11 551 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 CPNE2Q96FN4 548 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GPR137Q96N19 417 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 PRRT1Q99946 306 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GINS4Q9BRT9 223 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 SF3B5Q9BWJ5 86 aaKnown RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MYOZ1Q9NP98 299 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 NPDC1Q9NQX5 325 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 DLL4Q9NR61 685 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 PLSCR3Q9NRY6 295 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 B3GNT2Q9NY97 397 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MGAT4CQ9UBM8 478 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GHRLQ9UBU3 117 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GDF2Q9UK05 429 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 FBXL2Q9UKC9 423 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 PADI1Q9ULC6 663 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 PLEKHA6Q9Y2H5 1048 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 HS3ST3B1Q9Y662 390 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 CEP192Q8TEP8 1941 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 DCDC2BA2VCK2 349 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF736B4DX44 427 aaPredicted RBP7.95□□□□□ -1.14
TMEM116-209ENST00000550020 H0YC42 278 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 EIF1AYO14602 144 aaKnown RBP7.95□□□□□ -1.14
TMEM116-209ENST00000550020 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 RAD1O60671 282 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 HPP00738 406 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 RLN1P04808 185 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 UMODP07911 640 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ACSM4P0C7M7 580 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CTSSP25774 331 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 SFTPDP35247 375 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 P2RY4P51582 365 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CLDN6P56747 220 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 RAB14P61106 215 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 RAC1P63000 192 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 SPOCK1Q08629 439 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 PMPCAQ10713 525 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CAMK2DQ13557 499 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF528Q3MIS6 628 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ACTBL2Q562R1 376 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CLVS2Q5SYC1 327 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 C10orf128Q5T292 105 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 PDSS1Q5T2R2 415 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 LCN10Q6JVE6 187 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF813Q6ZN06 617 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 COMMD2Q86X83 199 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 GABRG1Q8N1C3 465 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 PNLDC1Q8NA58 520 aaKnown RBP7.95□□□□□ -1.14
TMEM116-209ENST00000550020 DTWD2Q8NBA8 298 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CLEC1AQ8NC01 280 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 OR8H1Q8NGG4 311 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 OR4C16Q8NGL9 310 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 OR2T35Q8NGX2 323 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 C10orf35Q96D05 121 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 EMC6Q9BV81 110 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 NELFAQ9H3P2 528 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 CDCP1Q9H5V8 836 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 EXO5Q9H790 373 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 ZFP64Q9NPA5 681 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 GLTPQ9NZD2 209 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 EIF3KQ9UBQ5 218 aaKnown RBP7.95□□□□□ -1.14
TMEM116-209ENST00000550020 MRPS18CQ9Y3D5 142 aaKnown RBP7.95□□□□□ -1.14
TMEM116-209ENST00000550020 BOLA1Q9Y3E2 137 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 SPAG17Q6Q759 2223 aa7.95□□□□□ -1.14
TMEM116-209ENST00000550020 A0A087WV48 116 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 TUBAL3A6NHL2 446 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 AGRPO00253 132 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 NOS1APO75052 506 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 MTRF1O75570 445 aaKnown RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 KLF7O75840 302 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 OR2A4O95047 310 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CD74P04233 296 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 TMIGD3P0DMS9 266 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF24P17028 368 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF28P17035 718 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CXCL3P19876 107 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CCL1P22362 96 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 MPZP25189 248 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 SRD5A2P31213 254 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF93P35789 620 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 RAD52P43351 418 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CBX5P45973 191 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CX3CR1P49238 355 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF133P52736 654 aaPredicted RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 EFNB2P52799 333 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CLDN17P56750 224 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 FOXL2P58012 376 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 RPS15P62841 145 aaKnown RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 H3F3AP84243 136 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 DHODHQ02127 395 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 ECH1Q13011 328 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CHAF1BQ13112 559 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 SSPNQ14714 243 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 RNASE10Q5GAN6 216 aaKnown RBP7.94□□□□□ -1.14
TMEM116-209ENST00000550020 PRAMEF20Q5VT98 475 aa7.94□□□□□ -1.14
TMEM116-209ENST00000550020 CARD17Q5XLA6 110 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms