RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 HIST2H3PS2Q5TEC6 136 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 PGBD2Q6P3X8 592 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 HIST2H3AQ71DI3 136 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 ZDHHC21Q8IVQ6 265 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 CYB561A3Q8NBI2 242 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 SLC26A10Q8NG04 563 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 OR8D4Q8NGM9 314 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 HAVCR1Q96D42 359 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 NSMCE2Q96MF7 247 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 GAL3ST1Q99999 423 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 BTBD10Q9BSF8 475 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 IFT27Q9BW83 186 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
COX6A1-203ENST00000550009 OPN4Q9UHM6 478 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 MAGEL2Q9UJ55 1249 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
COX6A1-203ENST00000550009 CMYA5Q8N3K9 4069 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 TRAV20A0A0B4J274 112 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 MLNRO43193 412 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 AHCYL1O43865 530 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 FABP3P05413 133 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 RPS6KA3P51812 740 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 ZMYND11Q15326 602 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 SAMD4BQ5PRF9 694 aaKnown RBP13.41□□□□□ -0.26
COX6A1-203ENST00000550009 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 ADCK1Q86TW2 530 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 BHLHE23Q8NDY6 225 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 OR10S1Q8NGN2 331 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 RAB1CQ92928 201 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 OR2V2Q96R30 315 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
COX6A1-203ENST00000550009 TMEM106BQ9NUM4 274 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 ZDHHC8Q9ULC8 765 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 POLR1DQ9Y2S0 133 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 NPTNQ9Y639 398 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 NBEAL1Q6ZS30 2694 aa13.41□□□□□ -0.26
COX6A1-203ENST00000550009 TCRBV5S2A0A599 114 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 TVP23AA6NH52 213 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 TRAPPC2LH3BP13 241 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 H3BSA7 217 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 HLA-DPB1P04440 258 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 FPR3P25089 353 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 PMELP40967 661 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 ZNF362Q5T0B9 420 aaPredicted RBP13.4□□□□□ -0.26
COX6A1-203ENST00000550009 SLC18B1Q6NT16 456 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 ZNF620Q6ZNG0 422 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 OR51L1Q8NGJ5 315 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 DDOQ99489 341 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 NSRP1Q9H0G5 558 aaKnown RBP13.4□□□□□ -0.26
COX6A1-203ENST00000550009 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 ESM1Q9NQ30 184 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
COX6A1-203ENST00000550009 SOX21Q9Y651 276 aaPredicted RBP13.4□□□□□ -0.26
COX6A1-203ENST00000550009 GMNNO75496 209 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 CYB5R3P00387 301 aaPredicted RBP13.39□□□□□ -0.27
COX6A1-203ENST00000550009 GSTM3P21266 225 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 SLC6A6P31641 620 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 GGT2P36268 569 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 MS4A2Q01362 244 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
COX6A1-203ENST00000550009 COX10Q12887 443 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 DCAF12L2Q5VW00 463 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 ZBTB46Q86UZ6 589 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 ZNF283Q8N7M2 679 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 C19orf18Q8NEA5 215 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 RAB39BQ96DA2 213 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 TIMD4Q96H15 378 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 SLC6A7Q99884 636 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 EGLN1Q9GZT9 426 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 CYSLTR2Q9NS75 346 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 LYVE1Q9Y5Y7 322 aa13.39□□□□□ -0.27
COX6A1-203ENST00000550009 F5H5K5 113 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 F5H5P2 479 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 ARPC3O15145 178 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 GASTP01350 101 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 CLUP10909 449 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 EPHA1P21709 976 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 MMP16P51512 607 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 MXRA7P84157 204 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 TSPAN31Q12999 210 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 LIPNQ5VXI9 398 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 ZNF770Q6IQ21 691 aaPredicted RBP13.38□□□□□ -0.27
COX6A1-203ENST00000550009 SHQ1Q6PI26 577 aaKnown RBP13.38□□□□□ -0.27
COX6A1-203ENST00000550009 ARL9Q6T311 187 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 UNQ6126/PRO20091Q6UXV3 157 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 ATG16L2Q8NAA4 619 aa13.38□□□□□ -0.27
COX6A1-203ENST00000550009 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms